KEGG   Paracoccus denitrificans: Pden_3200
Entry
Pden_3200         CDS       T00440                                 
Name
(GenBank) TrbL/VirB6 plasmid conjugal transfer protein
  KO
K07344  type IV secretion system protein TrbL
Organism
pde  Paracoccus denitrificans
Pathway
pde02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pde00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pden_3200
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pde02044]
    Pden_3200
Secretion system [BR:pde02044]
 Type IV secretion system
  Trb secretion system protein
   Pden_3200
SSDB
Motif
Pfam: TrbL Sirohm_synth_M
Other DBs
NCBI-ProteinID: ABL71281
UniProt: A1B6Y7
Position
2:364380..365702
AA seq 440 aa
MGGSGVIDNFLAVFTSYIDSGFGLLGGEVAFIATTLIVIDVTLAALFWAWGAEDDILARL
VKKTIFVGVFAWLITNWNSLARIVFDSFAGLGLMASGTGFTAADLMRPGRVAQTGLDAGR
PLLESISDLMGWVAVFENLIQILCLFFAWALVILAFFILAVQLFVTLIEFKLTTLAGFVL
IPFGLFGKTAFMAERVLGNVVSSGIKVLVLAVIIGIGSTLFSQFTTGFGGVAPTVDDAMA
IVLAALSLLGLGIFGPGIATGLVSGGPQLGAGAVAGTGLAVGGAALAAGGAAVLGAKGVA
ATARGGAATAGAASAAYTLNSAGQSGIGGAVSGAAGVGKGAGIAAMTPLRRAAASLKASR
DAGVKAAFTSTGGSTTQGTLGGPAAGVGGVAPTSGNAPAWAQRLRGQSLARGATVTAHAV
RASDSHGPGASVSLSESDKP
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgggcggatccggcgtcatcgacaatttcctggcggtcttcaccagctatatcgacagc
ggcttcggtcttctgggcggcgaggtcgccttcatcgccaccacgctgatcgtcatcgac
gtgacgctggccgccctgttctgggcctggggcgccgaggacgatattctggcccggctg
gtgaagaagaccatcttcgtcggcgtcttcgcctggctgatcaccaactggaacagtctc
gcgcgcatcgtcttcgacagtttcgccggtctcgggctcatggcctccggcaccggcttc
accgccgccgatctcatgcgccccggccgcgtcgcccagaccgggctcgatgccggacgg
ccgctcctggaatccatctccgacctgatgggctgggtcgcggtgttcgagaacctgatc
cagatcctctgcctgttcttcgcctgggcgctggtgatcctcgccttcttcatcctcgcc
gtgcagctcttcgtcaccctgatcgagttcaagctgaccacgctcgcgggcttcgtgctg
atccccttcgggcttttcggcaagaccgccttcatggccgagcgcgtgctgggcaatgtc
gtctccagcggtatcaaggttctcgtgctagccgtcatcatcggcatcggcagcaccttg
ttttcgcagttcaccaccggcttcggcggtgtcgcgccgaccgtggacgacgccatggcc
atcgtactcgcggcgctgtcgctcttgggcctcggtatcttcgggcccggtatcgccacc
ggcttggtttccggcggtccgcagcttggcgccggggccgttgcggggacaggactggcc
gtgggcggcgcggcactggccgccggcggcgctgcggtgctcggcgccaagggcgtcgct
gccaccgcgcggggcggggccgcgacggcgggggccgcctccgccgcctatacgctgaac
tcggccggacagtccgggatcggcggcgccgtctccggggccgccggtgtcggcaaaggc
gccggcatcgccgccatgaccccgctgcgccgggcggcggccagtctcaaggccagccgc
gacgccggcgtgaaagccgccttcaccagcaccgggggatcgaccacgcaaggaacgctc
ggcggcccggccgctggtgtcggcggtgtggcgccaaccagcggcaatgcgcccgcctgg
gcgcagcgcctgcgcggccagtcccttgcccggggcgccaccgtcaccgcccatgcggtg
cgcgccagtgacagccacggccccggcgcctccgtctccctttccgaaagcgacaagcca
tga

  All links  
Gene (7)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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