KEGG   Clostridioides difficile 630Derm: CD630DERM_10430
Entry
CD630DERM_10430   CDS       T03785                                 
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pdf  Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:pdf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdf03400]
    CD630DERM_10430 (sbcC)
DNA repair and recombination proteins [BR:pdf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CD630DERM_10430 (sbcC)
    Archaeal homologous recombinant proteins
     CD630DERM_10430 (sbcC)
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N ABC_tran
Other DBs
NCBI-ProteinID: CEJ97601
Position
1:1238216..1241743
AA seq 1175 aa
MRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRNT
KEYINSVCDKAIISYEFEIGSKNTRRRYIVDRTIARSKTGTKTSNARLIEVLNDNTQNVL
ADKVVEVNEKVAQVVGLTANDFTRSVVLPQDKFNEFLRLSRADRRDMLERIFNLEKYGRS
LGEKVKKRKNIQLQNLKDLKSKLSQYDGITEEVYNNINQELIELKNLEKDKNNALDLAQK
SYEESKTVYEEQLKLEKNELRKNELDLKNSEIKEKIALVENDSNAKKVDPYISSVQNLEK
KIDEDSFAVSNLEKKLAILNQELEVTKNRYEKINKIKNEEVPKLSEEKIRLQQAIKLEEE
LVLLDRELKELKESGINLNKTKVELEKVKQVSESRKDAVTKSIKEVEGKIDKVNISAELK
QKIFLAYEYEKDYNNVLEEKNQKLNKLEEILKETENINLKVRYIDKDKNDVNRNLENLSL
HLDVLLKKCPGKSADLLLKSEYVTELRNKANNTKENEIKKSSIQDELKIILESKFNTERE
VNLLNEKLENNRKNRDDLEKELEELKYLNLASELRRELKENMPCPVCGSKHHENHDITKY
DENISFVKEKLEKLEKEKISIRNNIEELNAKVSGYLSIEKMKTKELEDVKGKLGEIPSSQ
LLKKLDEEQRKLALLKSNIQEWEKEKESTENKVTLAKEEKNKIEKEELKIRESLNNYKKL
TRDLNIEIEGLENKCKKIKQEYLGLKTITKVSNLLSKVKEIRENEKELELLSTGHSNLLK
NRDSLDIKIRENESKLHEIEIELIKARELYVEKKLSRDNKYKEVISITKGDLAKNLLHNV
EENICKILEQEESSKKKLEEQRLEYEKNIAEKHNIDGRLKTAKEQYKDQKSTLNKLLAEN
KFESIYAVKRALLDTDAVKKLIEEILEHEEEQKLLSFKIKSSKEKLNGRSIKKEYFEQLK
DEIYNLKVEIGNISKDIGANQNQLITLKDSLDKINDFNKQLKVVEHNVDLLEELDKCVQG
NKFVEYVSTNQLKYIALEASKRLDGITKGRYALEIDSTLNFVMRDNFNGGERRSIDTLSG
GETFLTSLSLALALSSQIQLKGSAPLEFFFLDEGFGSLDSELLEIVIESLERLHSNNLSV
GIISHVEELKNRVPVKLLVSSSEAGIGSKVKIEYS
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgagaccaattagattagaacttacagggcttaatagctatattgataaacaagttata
gactttgaaaaattaattgaaagaggtttgtttgggatatttggaactactggaagtgga
aaatctacaatcttagatgcaataactattgctatgtatggaaatatatccagaaataca
aaagaatatataaacagtgtgtgcgataaggcaattatatcatacgagtttgagatagga
agcaaaaacactagaagaagatacattgtagatagaaccattgctagaagcaaaacagga
acaaagacctctaatgctagattaatagaagtattgaatgacaatacccaaaatgtttta
gctgataaagttgtggaagtaaatgaaaaagtagcgcaggtcgtaggattaacggcaaat
gattttactaggtcagtagttttaccacaagacaaatttaatgagtttctaagattatca
cgtgcagatagaagagacatgttagagagaatttttaatcttgagaaatatggaagaagt
cttggcgaaaaagtgaaaaagagaaaaaatatacagttacaaaatttaaaagatttgaaa
tcaaaattaagtcaatatgatggaattacagaggaagtatataacaatataaaccaagaa
ttaatagagttaaaaaatttggaaaaagataagaataatgctttagacctagctcaaaaa
tcttatgaagaaagtaaaacagtatatgaagaacaattaaagttagaaaaaaatgaactt
agaaaaaatgagcttgatttaaaaaatagtgagataaaagaaaagattgctcttgtagaa
aatgatagtaacgctaaaaaggtagacccatacataagttcagttcaaaatctagaaaaa
aagatagatgaagatagcttcgcagtaagtaatttagaaaagaaattagcaatattaaat
caggagcttgaagttacaaaaaatagatatgaaaaaataaacaaaattaagaatgaagaa
gtccctaaattgagtgaagaaaaaataagattgcaacaagcaataaaattagaagaagag
ttagttttattagatagagagttaaaagagctaaaagaaagtggaattaatttaaataag
actaaagttgaattagaaaaagtaaagcaggtgtcagagtccagaaaagatgcagttact
aaatctataaaagaagttgaaggaaagattgataaagtaaatataagtgcagaattaaaa
caaaaaatatttctagcatatgaatacgagaaagattacaacaacgtattggaagaaaaa
aatcaaaagctaaataaactagaagaaatactcaaagagacagaaaatataaatttaaaa
gttagatatattgataaagataagaatgatgtaaatcgtaatttagaaaatttatcactt
cacttggatgttcttcttaaaaaatgtcctggtaagagtgctgatttacttttaaaatct
gaatatgttactgaattaagaaataaagcaaataatactaaagaaaatgaaattaagaaa
agcagtatacaagatgaattaaagataatacttgaaagtaagtttaatactgaaagggaa
gtaaatttactaaatgaaaaacttgaaaataatagaaagaacagagatgacttagaaaaa
gaattagaagaactaaagtatttaaatttagcctctgaacttagacgtgaattaaaagaa
aatatgccttgtccagtttgtgggtcaaaacatcatgaaaatcatgatataactaagtat
gatgaaaatatatcttttgtcaaagaaaaactggagaaattagaaaaagaaaaaataagt
ataagaaacaatatagaggaattaaatgctaaagtaagtgggtatttatctatagaaaaa
atgaagactaaagaacttgaagatgtaaaaggaaaactaggggagattccatctagtcaa
ttattaaaaaaacttgatgaagaacaaagaaaacttgcattgttaaaatctaatattcag
gagtgggagaaagaaaaagagagtactgaaaataaagtaacattagctaaagaagaaaaa
aataaaattgaaaaagaagaattaaaaataagagagagtctgaataattataagaaatta
acaagagatttaaacatagaaatagaaggtttagaaaataaatgtaaaaaaattaaacag
gaatacctaggattaaagacgattactaaagtctctaatctattgtcaaaagtaaaagaa
ataagggagaatgaaaaagaattagaattactaagtactgggcattcaaatttattaaaa
aatagagactcactagatattaaaataagagaaaatgagagtaaactacatgaaatagag
atagaattaataaaggctagagaattatatgtagaaaagaaattgagtagagataataag
tataaagaagttattagcataacgaaaggtgatttagctaaaaatcttttacataatgtt
gaagaaaatatatgtaagatattagaacaagaagaatcaagtaagaaaaaattggaagag
caaagattagaatatgaaaaaaacattgctgaaaagcacaatatagatggtagacttaaa
actgctaaggaacaatataaagaccaaaaatcaacactaaataaactattggcagaaaat
aaatttgaaagtatatatgcagtaaaaagagctttattagatactgatgcagtaaaaaaa
ttgattgaagaaatactagagcatgaagaagaacaaaagttattatcatttaaaataaaa
tcatcaaaagaaaaattaaatggaagaagcataaagaaggagtactttgaacagttaaaa
gatgaaatttataatttgaaagtagaaataggaaatatatccaaagatattggagctaat
caaaatcagttaataacattaaaagactctttagataagataaatgattttaataaacaa
cttaaggtagttgaacacaatgtggacttattggaagaattagataaatgtgtacaagga
aataaatttgtagaatatgtttctacaaaccaattaaaatatatagcgttggaagcatca
aaacgattggatggaataacaaaaggaagatatgcacttgaaattgactcaacactaaac
tttgtaatgagagataactttaatggaggagaaagaagaagcattgatactctatctggt
ggagagacattcttgacatctctatcattagcacttgctctttcatctcaaatacaatta
aagggaagtgcaccattagaatttttctttttagatgaaggttttggttcattagatagt
gaacttttagaaattgttatagaatccttggaaagattgcatagtaataatctaagtgtg
ggtataataagtcatgtcgaggaacttaaaaatagagttcctgttaagctattagtttca
tctagtgaggctggaataggttcaaaagtaaaaattgaatatagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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