KEGG   Clostridioides difficile 630Derm: CD630DERM_20500
Entry
CD630DERM_20500   CDS       T03785                                 
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthaseB
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
pdf  Clostridioides difficile 630Derm
Brite
KEGG Orthology (KO) [BR:pdf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdf03009]
    CD630DERM_20500 (rluB)
Enzymes [BR:pdf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     CD630DERM_20500 (rluB)
Ribosome biogenesis [BR:pdf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CD630DERM_20500 (rluB)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 Neural_ProG_Cyt FBA_1
Other DBs
NCBI-ProteinID: CEJ98644
Position
1:complement(2320685..2321401)
AA seq 238 aa
MRINKYIASCGIASRRKAEEIILGGRIKVNGSVVKELSFNIDEEKDIVEFDNKKVKPSEN
YIYIVLNKPEGYITTVKDQFNRPSVIDILKDVRERVYPIGRLDYETSGLLILTNDGDLTY
KLTHPKHEIDKTYVASVKGIISDDEIRQFETGLKIEDYTTAPAKIRVTKENKEKNYSVCE
ITIHEGRNRQVRKMCKAINHPVLNLRRISVGKIVLKDTKVGEYRYLTEDEIKYLKSIK
NT seq 717 nt   +upstreamnt  +downstreamnt
atgagaattaataagtatatagcttcttgtggaatagcatcaagaagaaaagcagaagaa
ataattcttggaggaagaataaaggtaaatggaagtgtagtaaaagagttatcttttaat
attgatgaagaaaaagacatagtagaatttgataataaaaaagtaaaaccaagtgaaaat
tatatatatatagtattaaataaaccagagggatatataactacagtaaaagaccaattc
aatagacccagtgtaatagacatacttaaagatgtaagggaaagagtatatccaataggg
agattagattatgaaactagtggtttattaatacttactaatgatggcgatttaacatat
aagcttacccatccaaaacatgaaattgataaaacgtatgtggcaagtgtgaagggaatt
ataagtgatgatgagataagacaattcgaaacaggactaaaaatagaagattacacaacg
gcacctgccaaaataagggtaactaaagaaaataaagaaaaaaattattcagtgtgtgaa
ataactatacatgagggtagaaatagacaagtaagaaaaatgtgcaaagctataaatcat
ccagttttaaatttaagaaggatttctgtggggaaaatagtattaaaagacaccaaagtt
ggagaatatagatacctaacagaagatgaaataaaatatttaaaatcaataaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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