KEGG   Paenibacillus donghaensis: B9T62_24675
Entry
B9T62_24675       CDS       T04971                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pdh  Paenibacillus donghaensis
Pathway
pdh03410  Base excision repair
pdh03430  Mismatch repair
pdh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B9T62_24675 (recJ)
   03430 Mismatch repair
    B9T62_24675 (recJ)
   03440 Homologous recombination
    B9T62_24675 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdh03400]
    B9T62_24675 (recJ)
DNA repair and recombination proteins [BR:pdh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     B9T62_24675 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     B9T62_24675 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B9T62_24675 (recJ)
SSDB
Motif
Pfam: RecJ_OB ssDNA-exonuc_C DHH DHHA1 tRNA_anti-codon DUF4347
Other DBs
NCBI-ProteinID: ASA23701
UniProt: A0A2Z2KSS7
Position
complement(5395846..5398251)
AA seq 801 aa
MLHSKTKWHSPAADSDTVRELARSLSISPLLSSLLVNRGMETPEAALLFMEGGAEEQHDP
FLLQGMAEAVPRIRKALEEQEHILVYGDYDADGVSSTALMIHLLRHLGASFDIYIPHRSN
EGYGLHNHALDWALQQGVSLIITVDTGISAYHQVAYANQLRMDVIVTDHHEPPELLPDAY
ALINPKLPGCPYPFKGLAGVGVAYKLAQALLGSDVPAEWSEIAAIGTVADLMPLLGENRD
IVRSGLRSMRSSRFPGIRALLDVSGVALGTVSAVNIAFGMAPRINASGRLDHAGRAVALL
TTESDDEAGILAGELDLLNKERQLVVERIVTEATAKLELQITETGVPDIIVLADYDWNVG
VVGIVASKLLDRYYRPVVILDIHPETGMCKGSARSIPGLDIYEALHSCSDLMEHFGGHPA
AAGMSLHKDKVDAFAAALNQYAAGVLTEDHLVPVSPADAEVLLSELSLTAAAELDRLAPF
GMSNPQPRFIVRGVTVKETRTMGQESKHLKLVLQSGSSRIEAVAFGKGSLAGVLPAGTVV
DVLAELSVNEWNGSRKPQLMLQDLAVTSMQLFDLRGATDAERQALKLKELLMPAGGSPSH
AAAVFRDGRVAPQSELIGMSLWVYDKETGITPAGHPPSGLQLENEQVSLLCLMDVPETPE
QLDALLRAFPSPDNIALLHTVRDSRERLQMPTREHFKALYQGLAQIAPAPVPEQEVLRRL
SRQSSLSVRMLGMMLDVFEELEFIERNKGTVALRNQPAARSLTASRQYARLGQAAEMERY
FLEGSLAELQDWLQNLRLGAS
NT seq 2406 nt   +upstreamnt  +downstreamnt
ttgcttcattcaaaaacaaaatggcattctccggcagccgattccgataccgtgcgggag
ctggcccggagcctttctatttctccgctcctgtcctccctgcttgtgaaccgaggcatg
gaaacgccggaagcggccttgctatttatggaaggcggggcagaagagcagcatgatcct
ttcttgctccagggaatggctgaagcggttccgcgtatccgtaaggcgctggaagagcag
gagcatatcctggtctacggcgattacgatgccgacggcgtgtcaagcaccgcgctgatg
atccacctgctccggcatttgggcgcttcttttgacatttacattccgcaccgctccaac
gagggttacgggctgcataatcatgcgctggactgggccttgcagcaaggcgtttcactg
attattaccgtggatacgggcatcagcgcctatcatcaggttgcttatgccaatcagctg
aggatggatgtgatcgtaaccgatcatcatgaaccccctgagctgctgcctgatgcctat
gcgctgatcaatcccaagctgccgggttgtccttatcccttcaagggattggctggcgtt
ggagtggcctacaagctggcgcaggccttgcttggttctgatgtgccggccgagtggagt
gaaatcgccgcaatcggtacggttgcggatctgatgccgctgctcggtgagaaccgtgac
attgtccgcagtggattgcgcagcatgcgcagctcgcgtttccccggcatccgcgctttg
ctggatgtcagcggtgtggcgctgggtacggtcagcgcagtgaatattgcttttggcatg
gccccgcggatcaatgccagtggacgtctggaccatgcgggccgggcggtggcgctgctc
accaccgagtcggatgacgaggccggcatattggccggagagctcgatctgttgaacaag
gaacgccagctggtggttgagagaattgtaacggaagccacagccaagctggagctgcaa
atcacagaaacgggagtgccggatattattgtgcttgctgattatgactggaatgtggga
gtagtaggcattgtagcctccaagctgctggaccgctactatcgtccggtagtgatccta
gatattcatcccgagaccgggatgtgcaaaggttctgcccgctcgattcccggtctcgac
atctatgaggctttgcattcttgctcagacctgatggagcatttcggcggacatccggct
gcggccggtatgagtctgcacaaggacaaggttgatgcttttgcagcagccttaaaccaa
tatgctgctggagtgcttaccgaggaccatttggtccccgtgtctccggccgatgccgag
gttctgctatctgagctgtcattaaccgctgcagccgagctggacaggctggcgccattc
ggaatgtctaatccgcagccgcgatttatcgtgcgcggagttacggtcaaggagacacgc
acgatggggcaggagagcaaacacctcaagctggtgcttcaatccgggtctagccggatt
gaagccgttgctttcggcaaaggctcgctggcaggggtgctgcccgcaggaaccgtggtt
gatgtattggccgagctgtcggtaaacgaatggaacgggtcacgcaagccgcagctgatg
ctgcaggatctggccgttacctcgatgcagctgttcgatcttcgcggagctaccgatgcc
gagcggcaggcgctgaagctcaaggagctgctgatgcctgccggcggcagtccttcacat
gctgctgccgtcttccgggatggccgtgtagccccgcagagcgaattaataggcatgtcg
ctatgggtgtatgataaagaaaccgggatcacgcccgcaggccatccgccatccggactg
cagctggagaatgaacaagtgtccctgctgtgcctgatggatgtgccggaaacccccgag
cagttggatgccctgctgcgcgctttcccgagtccggacaatattgccctgctgcatacc
gttcgggacagccgggaacggctgcagatgccgacgcgcgagcacttcaaagcgttgtat
cagggactggcccagattgcacccgctcctgtaccggagcaggaggtactgcgcaggctg
agccgccagtcttcgctcagtgtacggatgctgggcatgatgctggatgtgttcgaagag
cttgaattcatcgagcgaaataaaggaaccgtggcacttagaaatcagcctgctgccaga
agcctgaccgcatcgcgccaatatgcccggttgggacaagcggcagaaatggagcgctat
ttcctggagggcagtctcgcagaactgcaggactggcttcagaacctccggcttggcgca
tcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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