KEGG   Parabacteroides distasonis: BDI_1089
Entry
BDI_1089          CDS       T00549                                 
Name
(GenBank) negative regulator of genetic competence
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pdi  Parabacteroides distasonis
Brite
KEGG Orthology (KO) [BR:pdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pdi03110]
    BDI_1089
Chaperones and folding catalysts [BR:pdi03110]
 Heat shock proteins
  HSP100
   BDI_1089
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA Clp_N AAA_5 AAA_16 Sigma54_activat AAA_22 nSTAND3 IstB_IS21 TniB AAA_14 ATPase_2 bpMoxR RsgA_GTPase AAA_18 AAA_7 ResIII AAA_3 UVR NACHT RNA_helicase Zeta_toxin TsaE Torsin AAA_24 AAA_33 SRP54 DUF815 DNA_pol3_delta2 DUF6003
Other DBs
NCBI-ProteinID: ABR42852
UniProt: A6LAY8
Position
complement(1263377..1265935)
AA seq 852 aa
MKNYSKRLIDVIEYSREEAARLQNSYIGPEHLMLGIIREGEGEAMRVLRELHTDPMDIKR
KIEQEIKNTFDSEDSVQHEIAISKTTERVLRMSMLESRLFKEDETDTEHLLLAILKEEFN
VAAKVLNDAGITYRSAYNILVSGTGLNNMEEFDEISDGYTDDDEDDEDEGFSSRREASRP
SSGTGAGAAQPKSPNDTPVLDNFGTDMTRAAAENRLDPIVGREKEIERLAQILSRRKKNN
PVLIGEPGVGKSAIVEGLALRIIQRKVSRVLFDKRVISLDMASIVAGTKYRGQFEERIKA
ILNELSKNPNIILFIDEIHTIVGAGSASGSMDAANMLKPALARGEIQCIGATTLDEYRKN
IEKDGALERRFQKVIVDPTTAEETLQILRNIKPRYEEHHNVIYTEDALQACVKLTERYIS
DRNFPDKAIDALDEAGSRVHISNIIVPKSIEELEAKIEDTKNEKLAAVKSQNFELAASFR
DKERQYLLQLEAAKAKWEQELQEHRETVDEEKVAEVVAMMSGVPVQRIAKAENVKLLEMA
DVLKSKVVGQDDAVQKIVKAIQRNRVGLKDPNKPIGTFMFLGPTGVGKTHLAKKLAEYLF
DSADSLVRIDMSEYLEKFAVSRLIGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAH
PDVFNLLLQVLDEGRLTDSLGRRIDFKNTILIMTSNIGTRQLKDFGRGVGFNTQMAGEPD
KDFSRSVIQKALNKAFAPEFLNRVDDIIMFDQLDKAAIHKIIDIELQGLYQRVSNLGYEL
SITDEAKDFIATKGYDVQFGARPLKRAIQKYLEDEMAEMIIRASVGEGDTIIVDFDKEEQ
KITTSIKKKDAE
NT seq 2559 nt   +upstreamnt  +downstreamnt
atgaaaaattattcgaaaagattgattgacgtgattgagtatagccgtgaagaagcggct
aggctccagaatagctatatcgggccggaacatttgatgctaggcatcatccgggaaggc
gaaggcgaggcaatgcgtgtcttgcgagagctacataccgatccgatggatattaaacgc
aagattgagcaagaaataaagaacacattcgattctgaggattctgtccagcatgagatc
gctataagtaagactacagaacgtgtcttgcgtatgagtatgctggaatctcgtttattc
aaggaagatgagaccgatacggaacatcttctattagcgatattgaaagaggagtttaat
gttgctgccaaggtgttgaacgatgcgggtattacttatcgttccgcatataatatatta
gtaagcggaaccggtttgaacaatatggaggaattcgacgagatcagcgacggatatacg
gatgatgacgaagatgacgaggacgaaggtttctcttctcgtcgtgaggcatctcgcccc
tcttccggtactggagcgggagccgctcaaccgaaatcccctaatgatacacctgttctg
gataacttcggaacggatatgacacgtgccgccgcagaaaaccgtctagatccgattgtg
ggacgtgagaaggaaattgagcgtttggcccagatattaagccgtaggaagaaaaataat
ccggtattgattggtgagccgggtgtgggtaagtcagctatcgtagagggattggcttta
cgcattattcagcgtaaggtttcccgggtgttattcgataagcgtgtgattagcttggat
atggcttctattgtcgctggtacaaaataccgcggacaattcgaggaacgtattaaggcc
atcttgaatgagttatcgaagaacccgaatatcatcctctttatcgatgagattcatacg
attgttggcgctggttccgcttccggatctatggatgcggcgaatatgctgaaacctgcg
ttggctcgtggtgagattcaatgcattggcgctactactttggatgaatatcgtaagaat
atcgagaaagacggtgcgttggaacgtcgtttccagaaagtgatcgttgatccgactacg
gcggaagaaactttgcagatcttgcgtaatatcaaacctcgttatgaggagcaccataac
gtgatctatactgaagatgctttacaagcgtgtgtaaaattgacagaaagatatatcagt
gaccgtaatttcccagataaggcgatcgatgctttagacgaggccggttcccgtgtacat
atatctaatatcattgttccgaaaagtatcgaagagcttgaggcaaagatcgaggatacg
aagaatgagaaattagcggccgtgaaatctcagaactttgagttagccgcaagtttccgc
gataaggagcgtcagtatttattgcaactggaggctgcgaaagctaaatgggaacaagag
cttcaagaacatcgggagaccgttgatgaagagaaggtcgctgaagttgttgccatgatg
tccggtgtacctgttcaacgtatcgctaaggcagagaatgtcaagcttctggaaatggcg
gacgtattgaaaagtaaggtggttgggcaggatgatgctgttcaaaagatcgtaaaggca
attcaacgtaaccgtgttggcttgaaagatccgaataagccgatcggaacttttatgttc
ctaggaccgacgggtgtaggtaaaactcacttggccaagaagcttgctgaatatctattt
gattcggcggattctttggtacgtatcgatatgagtgaatacttggagaaattcgctgtt
tcccgtttgatcggagcgcctcccggatacgttggttacgaggaaggtggtcagttaacg
gagaaagtacgtcgcaagccctattcggtggtcttattggacgaaatcgagaaagcgcat
ccggatgtatttaacttgctgttgcaagtcttggatgaaggccgtttgacggatagtctg
ggtagacgtattgacttcaagaatacgatcttgatcatgacttccaatatcggtacccgg
caattgaaagattttggtcgtggcgttggtttcaatacccagatggccggtgagccggat
aaggatttctcccgtagcgtgatccagaaagcgttgaataaagcgtttgctccagagttc
ttgaaccgtgtggatgatatcattatgttcgatcagcttgataaagccgctattcataag
attatcgatattgagttacagggtctgtatcagcgtgtatcaaatctgggctatgagttg
tcgatcacagacgaggcaaaagatttcattgccacaaaaggctacgatgtccaattcggt
gcccgtccgttgaagcgtgcgatccagaagtatctggaagatgagatggcggagatgatt
atccgtgcttcagtaggtgaaggcgatacgattatcgtagactttgataaggaagagcag
aaaatcacgacttcgataaaaaagaaagatgctgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (91)   

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