KEGG T05890: D0907

Pseudoalteromonas donghaensis: D0907_01810

Entry

D0907_01810       CDS       T05890

Symbol

trmA

Name

(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

pdj Pseudoalteromonas donghaensis

Brite

KEGG Orthology (KO) [BR:pdj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pdj03016]
    D0907_01810 (trmA)
Enzymes [BR:pdj01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     D0907_01810 (trmA)
Transfer RNA biogenesis [BR:pdj03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    D0907_01810 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Met_10 Methyltransf_31 MTS Methyltransf_15 Methyltransf_4 Methyltransf_11 PrmA Methyltransf_12 TcdA_TcdB_pore tRNA-synt_2b

Other DBs

NCBI-ProteinID:

AXV64101

Position

complement(383029..384126)

AA seq 365 aa
MAVIKIDTTQYDAQLSEKEQRITSQFRRFGVNTLEVFSSDPIHYRQRAEFRVWHEGDDLF
HIMFDQQSKEKIRVDEFDPAAPLVGEVMQVMIENLKGCEVLRRKLFQIDYLSSLSGEILV
SLLYHKPLNDEWLIAIKELKAKLSSQFKIDFIGRARKQKEVIGNDYVVERLNVNGKELIY
QQVENSFTQPNAKVNIKMLEWAQALCEPLNNDLLELYCGNGNFSIALAGSFNRVLATEIS
KSSVYSAQYNIAQNKVDNLDIIRMSSEEFTQAMKGERTFSRLDGIDLNGYNCQTILVDPP
RAGMDTLTCDLVANYDNIIYISCNPETLERDLDHLCKTHEVKRFAIFDQFPYTHHIESGV
FLQRK

NT seq 1098 nt +upstreamnt +downstreamnt
atggcggttataaaaattgatacaactcaatatgatgcacaattgagtgagaaagagcag
cgcatcacgtcacagtttaggcgctttggtgtaaacacattagaagtgttcagctctgat
ccaattcactaccgtcaacgtgcagagtttagagtgtggcatgagggcgacgatttattc
cacattatgtttgatcagcaaagcaaagagaaaattcgcgttgatgaatttgatcccgcc
gcgccactcgttggcgaagtgatgcaggtgatgattgaaaatttaaaagggtgtgaggta
cttcgccgcaagttattccagattgattacctctctagcttaagtggtgaaattcttgtt
agtttgctttaccacaaacctttaaacgatgaatggctaattgcgattaaagagcttaaa
gcaaaattaagcagccagtttaaaatcgactttattggtcgtgcacgtaagcaaaaagaa
gtgattgggaacgactatgtcgttgaacgattgaacgtaaatggtaaagaactcatttat
cagcaagtagaaaatagctttactcaaccaaacgcaaaagtgaacattaaaatgctggaa
tgggcacaagcgttgtgtgagccccttaataatgatttgctagagctgtattgtggtaat
ggtaacttttcaattgcactagccggttcatttaaccgagtacttgcgactgagatctca
aagtcatcggtttattctgcacagtacaatattgctcaaaacaaagtcgataatttagat
atcattcgtatgtcgagtgaagagtttacacaagccatgaaaggcgaacgtactttttca
cgtttagacggtattgatctaaacggctataactgccaaacaattttagtcgaccctcct
cgagcggggatggatactcttacctgtgatttggtggcgaactacgacaacattatctat
atctcttgtaatcccgagacattagaacgagatcttgatcacctttgcaaaacacacgaa
gtgaaacgttttgcgatttttgatcaattcccctatacacatcatattgagtctggcgtc
tttttacagcgtaaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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