KEGG   Pseudoalteromonas donghaensis: D0907_03640
Entry
D0907_03640       CDS       T05890                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pdj  Pseudoalteromonas donghaensis
Pathway
pdj03030  DNA replication
pdj03430  Mismatch repair
pdj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D0907_03640
   03430 Mismatch repair
    D0907_03640
   03440 Homologous recombination
    D0907_03640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdj03032]
    D0907_03640
   03400 DNA repair and recombination proteins [BR:pdj03400]
    D0907_03640
Enzymes [BR:pdj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D0907_03640
DNA replication proteins [BR:pdj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D0907_03640
DNA repair and recombination proteins [BR:pdj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D0907_03640
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: AXV64437
Position
781898..782521
AA seq 207 aa
MVKRWLSRYMARKQLLAADAYKERYVVIDMELTGLDPRQHEIVSVAWVMIEDQCIKMSGA
QHIINKDVQSLEQSPIYHGIAKQDIDSGESLEAILAKLHQHVDDCILVFHNATLDWGFLK
QACRKLGLEAKARLILDTFVIEKKRLHQQGHEIGHDDLTLSECRKRYGLPHYSSHHALTD
AMATAELFLAQCHQISRGKALKVGELL
NT seq 624 nt   +upstreamnt  +downstreamnt
atggttaaacgttggctcagtcgttatatggctcgcaaacaattattggcagctgatgcc
tataaagaacgttacgttgtgatagatatggaactaacggggcttgatccccgccaacat
gaaattgtctcggtggcatgggtgatgatagaagaccagtgcattaaaatgagtggggca
cagcacataattaataaagacgtacagagcctagagcaaagccctatttatcacggcatt
gccaagcaagatatcgatagcggtgaaagccttgaagcaattcttgctaagcttcaccaa
cacgttgatgactgtattttagtttttcataacgcgacgcttgattgggggtttttaaaa
caagcgtgccgtaaactaggcttagaagctaaagcgcggttaattcttgatacgttcgtt
attgaaaaaaagcgtctccatcagcaaggccatgaaataggccacgatgacctaacatta
agcgagtgccgtaaacgctatggcttacctcattacagctctcaccatgctttaaccgat
gccatggccaccgccgagctttttttagcgcagtgccatcaaatcagtcggggtaaagcc
ttaaaagtgggggagttgctgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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