KEGG   Pseudoalteromonas donghaensis: D0907_09250
Entry
D0907_09250       CDS       T05890                                 
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
pdj  Pseudoalteromonas donghaensis
Brite
KEGG Orthology (KO) [BR:pdj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdj03009]
    D0907_09250 (rluC)
Enzymes [BR:pdj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     D0907_09250 (rluC)
Ribosome biogenesis [BR:pdj03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    D0907_09250 (rluC)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AXV65447
Position
complement(2027708..2028676)
AA seq 322 aa
MSEKTGLQVSFVTIGEDHLGQRIDNFLITHLKGVPKSAVYKILRKGEVRVNKKRIKPVYK
LQLDDVIRIPPIKVAEKDEFVPKKLDKVKQLEEAILFEDKYLMVINKPSGMAVHGGSGLS
YGLIEALRVLRPEERSLELVHRLDRDTSGCLLISKRRSVLTHLHQQLREKTMEKNYWALV
DGQWDAKTKNVTEGLRKNTLKSGERVVRVDNTEGKPSHTRFRVLERYAECSLVQASPVTG
RTHQIRVHTQCKGHPIACDDKYGVAEFDQYVNKLTGLNRLFLHAHDLRFIHPKNETTMHV
EAPLDKALSNCIKKLRADNEQV
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtcagaaaaaaccggcttacaagtatcatttgttaccataggtgaagaccacttaggt
caacgcattgataactttcttattactcacctgaagggtgtgcctaaaagtgcagtttat
aaaattcttcgtaaaggtgaagtgcgagtaaataaaaagcgcattaaacccgtttataaa
ttacaacttgatgatgttattcgtattccgcccataaaagtggccgaaaaagatgaattt
gtgccgaaaaagctagataaggttaaacagcttgaagaggccattttatttgaagataaa
tacttgatggtgattaataagccgtcaggaatggcggtgcatggcggcagtggtttaagt
tatggcttaatcgaggcactgcgagtacttcgcccagaagagcgcagccttgaactggtt
caccgtcttgaccgtgatacttcaggctgtttacttatttcaaagcgccgttcagtgctt
acacacttgcatcagcagttgcgtgaaaaaaccatggaaaaaaattattgggcactggtt
gatgggcaatgggatgcgaaaactaaaaacgtcactgaaggcttacgtaaaaatacttta
aagtctggtgagcgcgtggtgcgtgtagacaataccgaaggtaaaccatcgcacacacgt
ttccgtgttctagagcgttatgcagagtgttcactggtgcaagcgtcgccggtgactggg
cgtactcaccaaatccgtgttcatacgcaatgcaaaggtcacccaattgcgtgtgatgat
aaatatggtgtggctgaatttgatcaatacgttaataagttaacggggttaaatcggtta
tttttacatgcgcatgatttacgctttatccaccctaaaaacgaaacaacgatgcatgtt
gaagcgccgttagataaagctttaagtaattgtattaaaaagttacgtgctgataatgaa
caggtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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