KEGG   Pseudoalteromonas donghaensis: D0907_09360
Entry
D0907_09360       CDS       T05890                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
pdj  Pseudoalteromonas donghaensis
Pathway
pdj01501  beta-Lactam resistance
pdj01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:pdj00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    D0907_09360
   01503 Cationic antimicrobial peptide (CAMP) resistance
    D0907_09360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdj03036]
    D0907_09360
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pdj02000]
    D0907_09360
   01504 Antimicrobial resistance genes [BR:pdj01504]
    D0907_09360
Chromosome and associated proteins [BR:pdj03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    D0907_09360
Transporters [BR:pdj02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   D0907_09360
Antimicrobial resistance genes [BR:pdj01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    D0907_09360
SSDB
Motif
Pfam: HlyD_D23 Biotin_lipoyl_2 HlyD_3 CusB_dom_1 OEP TPR_MLP1_2 N_NLPC_P60
Other DBs
NCBI-ProteinID: AXV65467
Position
2052171..2053376
AA seq 401 aa
MRLPFASAKLSLSALFFVTAPLLLQGCSEAPQQQQGQMHPAAVATMTMTPQDAPFTIELP
ATLSGSKEVEVRARVAGILESRNFEEGQRVEQGHSLFTIDLEPYQLAVDRAQAALDGANA
ALVQANRDVKRLAKLRAEKSVSQRDYDNASSAYDIAKTDLEAAKVALKQAQLNLEYAQVK
APVAGVMGREFVSEGTFVSGPDLLLTQMTQFDPIRIRFGLSEREQLQMRQDVQNGSLTLP
EQGHWQTKIKLQDGSVYGKTGEVNFSDVRINPNTGTSEFQAIIPNPDFQLRPGQFVRIEL
SGAVRKNAIIVPQRAVLDNGTGKFVYVVSKNEQGMDVALPAPVTVGEWVKQPNNEQYQNF
WLIKSGLKEGDNVIVDGMARIFFPGMPVNVGQSAANSNHAE
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgcgcctgcctttcgcgtctgccaaattatcattatctgcgttgttttttgtaactgca
cctttactattacaaggttgctcagaagcacctcagcagcaacagggtcaaatgcaccct
gccgcggtagcaactatgacaatgacaccgcaagatgccccctttactatcgaattacct
gctacgttgtctggttcaaaagaagtcgaagttcgtgctcgcgttgcgggaattcttgaa
tcacgtaattttgaagaaggtcaacgtgttgaacaaggtcactctttatttactatcgac
cttgaaccttatcaattagcggttgaccgtgctcaagctgcacttgatggagccaatgca
gcgttagtacaagctaacagagatgtaaaacgtttagctaaattacgcgcagaaaaatct
gtgtcgcaacgcgattacgataatgcgagttcagcttacgacattgcaaaaacagatctc
gaggcggcgaaagttgccctaaaacaagcgcagttgaaccttgaatatgcacaagttaaa
gccccggttgccggtgtaatgggtcgtgaatttgtctcagaagggacctttgtatcgggg
cccgatttattgcttacacaaatgacacagtttgatccaatccgtatccgctttggttta
tctgagcgagagcagttacaaatgcgtcaagatgttcaaaatggctctctgaccttacct
gagcaaggccattggcaaacaaaaattaaacttcaagacggctctgtgtacggtaaaaca
ggtgaagttaacttctcagatgtgcgtattaacccaaatacaggcaccagtgaatttcaa
gcgattattccaaaccctgattttcaattacgtcctggtcaattcgtccgtattgagtta
agtggtgctgtgcgtaaaaatgcgatcattgtgccacagcgtgctgtactggataacggc
acaggtaagtttgtgtacgttgtcagtaaaaatgagcaaggcatggatgttgccctgccg
gctcccgtaacggtaggagaatgggttaaacaaccaaataacgagcaatatcagaacttt
tggctgattaaaagtggccttaaagaaggcgataacgtgatagttgatggaatggcgcgt
attttcttccctggtatgccagtgaatgttggccaatcggctgcaaattcaaaccacgca
gaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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