KEGG   Pseudoalteromonas donghaensis: D0907_19885
Entry
D0907_19885       CDS       T05890                                 
Name
(GenBank) restriction endonuclease subunit S
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
pdj  Pseudoalteromonas donghaensis
Brite
KEGG Orthology (KO) [BR:pdj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pdj02048]
    D0907_19885
Enzymes [BR:pdj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     D0907_19885
Prokaryotic defense system [BR:pdj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   D0907_19885
SSDB
Motif
Pfam: Methylase_S
Other DBs
NCBI-ProteinID: AXV67602
Position
unnamed2:2626..4341
AA seq 571 aa
MVSSHLPWLEVKLGEVVPYGKTEKCKLSDVTGDTWILELEDIEKDSSKIIQRLDVNARPF
KSTKNKFSKGDVLYGKLRPYLNKVVIADKPGVCSTEIIPLNAGSYIHNRYLFYWLKTKTF
LDFVNSVSYGVNMPRLGTKDGLVAPFVLAPLAEQKVIADKIDTLLSQVEATKARLERIPK
ILKTFRQSVLVAAVSGKLTEKWRNNNRCTPVHETIANIETARQLVIKGKDKKAKSHLKEE
EYVIPNTWQWVSLDSLSKKITDGAHHTPTYTESGIHFISVKDIRDGAIDFSDTKFISEKE
HLKLSKRCPVEVGDLLVTKSGTIGRTAIVKANIEFSLFVSVALIKPASIEVNTKFIDISL
QKWVNEIDVSSRIVGSAIKNLHLRDIKELAIPFAPKEEQAVIVHRVEELFDFAKNIEQKT
NAALERVKNLRQSVLAKAFRGELTADWRAANPDLISGDNSAEALLEKIKAEREVTKKPPK
PKHTAVKKKTGSRMSKKIIEAVEALKEAKKPLNGQELLAASGYPSDSSTEQLEQFFLDIR
KALTVDKSIIKLERTHDGQDWFALAESATKE
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggtttcctctcatctaccttggcttgaagtcaagctcggcgaggtagttccatatggt
aaaactgaaaaatgcaaattatctgacgtgacgggtgatacttggatacttgagcttgaa
gatatagaaaaagatagttcaaagatcattcaaaggttggatgtaaatgcacgaccgttt
aaaagcacgaaaaataaatttagcaaaggagatgttctttacggaaaactgagaccttac
ttaaataaggttgtcattgcggacaagcccggagtttgttctactgaaattatacctcta
aatgctggctcgtatattcacaatcggtacctattttattggttaaaaaccaaaacattt
ttagattttgtaaattctgttagctatggggtaaatatgcctcgacttggcactaaggat
ggattagttgccccatttgttttagctccactagctgaacaaaaagtcatcgctgacaag
attgataccctcctgtcacaggtggaagccaccaaagctcgtctcgaacgcatcccaaaa
atcctaaaaacctttcgccaatcagtcttagttgcggcagtaagtgggaaattgaccgaa
aaatggcgtaacaataaccgctgtacacctgtccacgaaactattgcaaacatagaaact
gcaaggcaattggttataaaaggaaaagataaaaaagctaagtcccatttgaaagaggaa
gagtatgtaattcccaatacatggcaatgggtctcacttgattcactttcaaaaaagatt
accgatggtgcacaccataccccaacgtacacagaatcaggtattcattttatatcggta
aaggacattcgtgacggagccatagatttttccgatactaaatttattagtgaaaaagaa
catctaaaattatccaaaagatgtccagtagaggtcggcgatctacttgtaacaaagagt
gggaccataggccgtactgcgatagttaaagcgaatattgaattctcattattcgttagt
gtggctttaattaaacctgccagtattgaggtaaatactaagttcatagatatttcactt
cagaagtgggtcaatgaaattgatgtttcaagtcgaatagtgggatcagctatcaaaaat
ttgcacctcagagatatcaaggagttagcgataccatttgctccaaaagaagaacaggcc
gtaattgtccatcgagtcgaagagctgttcgactttgccaaaaacatcgagcaaaaaacc
aatgccgcattggaacgcgtcaagaacctcagacaatccgtcttagccaaagcttttcgt
ggcgaacttactgccgactggcgcgccgccaacccagatttaataagcggcgacaacagc
gctgaggctttattagagaagattaaggctgagcgcgaggtgacaaagaagcctccaaaa
ccaaaacacaccgccgtaaaaaagaagacaggtagccgcatgagcaaaaagatcatcgaa
gccgttgaggcattaaaagaagctaagaagccgttaaatggccaagaattgctagcagcg
tcgggctaccccagcgacagcagcaccgaacaactggagcaatttttcttggatattcgt
aaagcccttaccgtagataaatcaatcataaaacttgaacgtactcacgatggccaggac
tggtttgcattagctgaatcagcaaccaaagaatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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