KEGG   Pseudomonas aeruginosa DK2: PADK2_00435
Entry
PADK2_00435       CDS       T02161                                 

Definition
(GenBank) hypothetical protein
  KO
K11901  type VI secretion system protein ImpB
Organism
pdk  Pseudomonas aeruginosa DK2
Pathway
pdk02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pdk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PADK2_00435
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdk02044]
    PADK2_00435
Secretion system [BR:pdk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PADK2_00435
SSDB
Motif
Pfam: T6SS_VipA Herpes_UL69
Other DBs
NCBI-ProteinID: AFM62382
Structure
PDB: 
4UQY 4UQZ 5N8N

Position
100409..100927
AA seq 172 aa
MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPQAAVADR
KFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFESMDDFSPAAVARKVDSLN
KLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAPKPKDDEPQA
NT seq 519 nt   +upstreamnt  +downstreamnt
atgggaagcactaccagcagtcagaagttcatcgccaggaaccgggcgccacgcgtgcag
atcgagtacgacgtggagttgtacggtgccgagaagaaggtccagctgcccttcgtcatg
ggcgtcatggccgacctcgccggcaagcccgccgaaccccaggcggcggtcgccgaccgc
aagttcctggagatcgacgtggacaacttcgatgcccggctgaaggcgatgaagccgcgg
gtggccttcaacgtaccgaacgtgctgaccggcgaaggcaacctgagcctggacatcacc
ttcgagagcatggacgacttcagccccgccgcggtggcgcgcaaggtcgattcgctgaac
aagctgctcgaggcgcgtacccagctggccaacctgctgacctacatggacggcaagacc
ggcgccgaggaaatgatcatgaaggcgatcaaggacccggccctgcttcaggccctggcc
agcgcgccgaagcccaaagacgacgagccgcaggcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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