KEGG   Pyrodictium delaneyi: Pyrde_1135
Entry
Pyrde_1135        CDS       T04114                                 
Name
(GenBank) ATPase involved in DNA repair
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pdl  Pyrodictium delaneyi
Brite
KEGG Orthology (KO) [BR:pdl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdl03400]
    Pyrde_1135
DNA repair and recombination proteins [BR:pdl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Pyrde_1135
    Archaeal homologous recombinant proteins
     Pyrde_1135
SSDB
Motif
Pfam: AAA_23 SMC_N Rad50_zn_hook AAA_13 AAA_21 AAA_15 AAA_29 SbcC_Walker_B ABC_tran AAA_27 GAS Med9 Nuf2_DHR10-like Baculo_PEP_C AAA_22 AAA_16 CTU2 DUF1664 CENP-F_leu_zip Laminin_II DUF6011
Other DBs
NCBI-ProteinID: ALL01183
UniProt: A0A0P0N4B4
Position
complement(1115287..1118037)
AA seq 916 aa
MIIERVELENVLSHRRTRIDFGRGIIAIVGPNGAGKTSIIDAITYALFGSHSRGTRSRKD
ALIRLGSSIARISVEFTANGHKYRLQKTIQRNGATQALLYLIDGGTAKLMARGVESVKAE
LKRIIGIDPLLADLLLVTRQGEIDEILVDRDRRIDVMNTILRLRAIEKAYERLAVIIRML
RRDKENKEELYRTEEARLREAEESAREYERIVKELEKLRPALEKAENEYSRLQEQAIELR
RLKQRFDFLRAKREELARELNRLEREYEEARREYEIALNAKEELKELERLEKDLQLIEEA
VNLVNEIRREKQHLESFASRMERIKEELRDFPEAERKANEYERLRSLLDELEQDSRQYHQ
VKSQLEQLEARAKLLRAKAEAETSRLLERLRTSIPLDFPREPHKIIEKLESMLASLERTI
DTTRAKLENVHGQVEAKRSEIRDLEDKLMKLTEAQGRCPLCGRPLSDEHRVELISKIRAQ
KKRLEAELRRLESQETLLRNELRDLESRKRLIERLARDAQGAAKRIELMLREAEDAEQQK
QRLQQQYLELFAKYKEYEEAKQRLRELEAWVSKYQKLRARMDEYKSLESETTRLKAEISK
REQKLKEILDSIKLSIEELEEASKRISYYREYIAGVKSEAARLPRAEAKLRELEAEIDRV
RSELESIDSELEEMGDVDTALEQTEVELREREQELRELRDRVARLEGMREKLEAMAAKTE
LLRSRVSQLREELKRYQEALQALEKIRRALGPDGVPRIIRQAVRNILEYHLRDTLMKFNI
DFLDVRLEDDYSVVLVTREGEKTVSMLSGGERIALAIAYRLALARVVGERIESMIMDEPT
IHLDEEKRRELVEIIKYGLEASGLLQLIVVTHDREIEDAADKVIEVTKVDGASIVRIRSP
GDETTSIRAEYGLAAH
NT seq 2751 nt   +upstreamnt  +downstreamnt
gtgataatagagcgcgtggaattggagaacgtgttgagccataggaggacaaggatagac
tttggccgcggaataatagctatagttggccccaatggggccggcaagacaagcatcata
gatgctataacttatgcattattcggctcccacagccgcggcactcgtagccgtaaggac
gcgcttatacggctaggctcgtctattgcacgtatcagtgtagagttcacagcaaacggg
cacaagtatcgcctacagaagaccatccagcgcaatggagcaacccaagccctcctatac
ctcatagacgggggaacagccaagctcatggcgcgtggcgtcgagagtgtaaaagctgag
cttaagagaattatcgggatagacccgctcctagctgacttactgcttgtgacaaggcag
ggcgagatagacgaaatactcgtagaccgggatagacgcatagacgtcatgaatactatc
ctacgactacgagccatagagaaagcctatgagcgcctggcggttataattaggatgctg
cgtagagacaaggagaacaaggaggaactataccgcactgaggaagcacgccttcgtgaa
gctgaagaaagtgcccgtgagtacgagaggatagttaaggagctggagaaactgaggcct
gctctcgagaaggccgagaacgagtatagccgtctacaagagcaggccattgagctacgg
agactaaaacagcgtttcgactttctaagagcaaaaagggaagagctagcaagggagctc
aataggttagaacgcgaatatgaggaggccaggagagaatatgaaatagcacttaacgcg
aaggaggagctgaaggaacttgagagactcgagaaggatctacaactcatagaggaagct
gtaaacctcgtaaacgagattagacgggagaagcaacacctggagtcctttgcatcaaga
atggagagaattaaggaggagctgcgagactttccagaggctgaacgcaaggcaaatgag
tatgagaggctcagatcacttctcgatgagctagagcaagacagcaggcagtatcaccaa
gttaagtctcagctagaacaactagaggctcgagcaaagcttcttagagcgaaggccgag
gctgagactagtagactactcgagaggcttaggacaagtatacctctggacttcccccgt
gaaccacacaagattatcgagaagcttgaatcaatgctcgctagcctagagaggaccata
gatactaccagggcgaagctcgagaacgtacatggacaagttgaggctaagcgatcagag
atacgtgaccttgaagacaagcttatgaagcttacagaggctcaggggagatgccctcta
tgcggtagaccgctaagtgatgagcatcgtgtggagcttatctctaagatacgtgcccag
aagaagcggctagaagctgagctaaggaggctagagagtcaggaaaccctgctgcgtaac
gagcttagggatctagagtcgcgaaaacggctaatagagcggctcgcaagggatgcccag
ggagccgctaagagaatagagttaatgcttcgagaggccgaggacgctgaacaacagaag
cagaggctccagcaacagtatctcgagcttttcgcgaagtataaggagtacgaggaggca
aaacagagactacgcgagctggaagcatgggtaagtaagtaccaaaaactccgggcacgg
atggatgaatacaagtctctcgaatcggagaccactagactcaaggccgagattagcaag
cgcgagcaaaaactcaaggagatacttgatagtattaagcttagcattgaagagctcgag
gaggcctctaagcggataagctactacagagaatacattgccggcgtgaagagcgaggct
gctagactcccccgggctgaggcaaagttacgcgagctagaggctgagattgatagggtc
cggagcgagctggagagtatagactccgagctagaggagatgggcgatgtagatactgct
ctagagcagacagaggtcgaacttagagagcgtgaacaagagcttagagagctccgggat
agagtcgcgcggctagagggtatgagggagaaacttgaagccatggcagcgaagactgag
cttctacggagccgggtatcacagctacgagaggaactcaaacggtaccaggaggcgctt
caagccctggagaagatacgtcgtgcactaggccctgacggtgtaccacggataattagg
caggctgtgcgcaatattctcgagtaccatctacgggatacactgatgaagttcaatatt
gacttccttgatgtaaggcttgaagatgattatagcgttgtactagtgacgcgtgagggc
gagaagactgtgtctatgctcagcggcggtgagcgcatagcacttgccatagcttatagg
cttgcgcttgcccgagtcgtcggagagcgcatagagtccatgataatggatgagcctacc
atacatcttgacgaggagaagcgacgcgaactagtagagattatcaagtatggattggag
gctagcggtctgttacaactgatagttgtgacccacgacagggagatagaagatgctgcc
gacaaagtaatagaggttacgaaggttgacggtgctagcattgtgagaatacgttctcca
ggcgacgagaccaccagcatccgagccgaatacggattagccgcgcattag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (88)   

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