KEGG   Pyrodictium delaneyi: Pyrde_1217
Entry
Pyrde_1217        CDS       T04114                                 
Name
(GenBank) Transcription factor E (TFE)
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
pdl  Pyrodictium delaneyi
Pathway
pdl03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pdl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Pyrde_1217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdl03021]
    Pyrde_1217
Transcription machinery [BR:pdl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     Pyrde_1217
 Prokaryotic type
  Archaeal type
    TFE
     Pyrde_1217
SSDB
Motif
Pfam: TFIIE_alpha GntR HTH_24 HTH_36 HTH_IclR TF_Zn_Ribbon HTH_11 HVO_2753_ZBP MarR_2 Mu-like_Com RNA_POL_M_15KD TrmB zf_C2H2_10 HypA TackOD1 HTH_9
Other DBs
NCBI-ProteinID: ALL01265
UniProt: A0A0N7JD57
Position
complement(1205522..1206040)
AA seq 172 aa
MEKLYTFIERLIDRDARLVFQALYEEGGELSEIDLAEKTGLKLNAIRRSLNLLAEKGLAV
YRRQKHPEKNRLVFYWRINYEGLPAIIEARKRATLEKLRTLLEREETISYYMCPNDGTKY
TFDEALDHEFACPRCGTMLVPDEDRELRIQIIRQYIALLEAELGSAKPRRPV
NT seq 519 nt   +upstreamnt  +downstreamnt
gtggagaaactctacacgttcatagagaggctgatagaccgggatgcgcggctagtcttc
caggcactgtatgaggagggcggtgaactctcagagatagacttagccgagaagactgga
ctaaagctgaacgctatacgccgttcccttaaccttctcgcggagaaggggcttgcagta
taccggaggcagaaacaccccgagaagaataggctagtcttctactggaggataaactac
gagggactcccagcaataatagaggcgcgtaaacgggctacgctagaaaagctcagaacg
ctactagagcgcgaggagacaatcagctactatatgtgccccaacgacggcactaaatat
accttcgacgaggccctcgaccacgagtttgcatgcccgcgttgcggcacaatgctggtc
cccgacgaggatagggagctacgcatacagattatccggcaatacatagccctgctggag
gcggagctcggcagtgctaagcctcgtagacctgtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (27)   

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