KEGG   Pediococcus damnosus: ADU72_0278
Entry
ADU72_0278        CDS       T04321                                 
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
  KO
K08316  16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Organism
pdm  Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:pdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdm03009]
    ADU72_0278
Enzymes [BR:pdm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     ADU72_0278
Ribosome biogenesis [BR:pdm03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    ADU72_0278
SSDB
Motif
Pfam: Cons_hypoth95 MTS Methyltransf_31 Methyltransf_15 TRM PrmA MethyltransfD12 Met_10 N6-adenineMlase Methyltrans_SAM Nrap_D2 DNA_methylase RsmJ Methyltransf_25 AAA_31 UPF0020
Other DBs
NCBI-ProteinID: AMV66227
UniProt: A0A0R2HKI4
Position
complement(115239..115802)
AA seq 187 aa
MRVVSGDFGGRRLKAVPGVKTRPTTDKVKESIFNMIGPYFDGGASLDLFAGSGGLSIEAV
SRGINQAVLVDKQRQAIQTIEQNVMVTKAENQFKIIRQDAKIALNILADQGKRFDLVFLD
PPYKLQKITQNMAKMVNLNLLNAGAIIVCETDQFAKLPETLPNFTLWKRQDYGITEISIY
QFDETGD
NT seq 564 nt   +upstreamnt  +downstreamnt
atgcgagttgtatctggagattttggggggcggcggttaaaggcagtcccaggagtaaaa
acccgtccgactacggataaagttaaggaatccatttttaacatgattggtccttatttt
gatggtggggcctctttggatctttttgcggggagtggtggtttgagtattgaagccgtt
tctcggggaattaatcaagcggtgttagttgataagcaacggcaggccattcaaacaatt
gagcaaaatgtgatggtgacgaaggctgaaaatcaatttaaaattatccggcaagatgcc
aaaattgccctaaatatcttggcagatcagggaaaacggtttgacctagtatttttagat
ccgccttataagttacaaaaaatcacgcaaaacatggcgaaaatggtgaatttaaacttg
ttaaatgccggggccattattgtttgtgaaacagatcaatttgcaaaattgccagagaca
cttcctaactttaccctgtggaagcgtcaagactatggcattacggagattagtatttat
caattcgatgaaacaggtgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (36)   

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