KEGG   Parascardovia denticolens: PSDT_1170
Entry
PSDT_1170         CDS       T03978                                 
Name
(GenBank) ribonuclease H
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
pdo  Parascardovia denticolens
Pathway
pdo03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pdo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSDT_1170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdo03032]
    PSDT_1170
Enzymes [BR:pdo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     PSDT_1170
DNA replication proteins [BR:pdo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    PSDT_1170
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     PSDT_1170
   Elongation factors (archaeal)
     PSDT_1170
SSDB
Motif
Pfam: RNase_H HetR_C
Other DBs
NCBI-ProteinID: BAR05689
Position
1432274..1433260
AA seq 328 aa
MNNQVIVSTDGSALANPNGAMGWGWAEHVPAGRKPIASTGQDCDCGGASNGTNQIGELSA
VLQALRTHRGSYPLLIETDSQYAINCSTKWIHGWKKNGWKNSKKEPVKNSDLIKAIDGEI
RSRAGKVSFTWVKGHAGDFYNEKVDDLARGFAEKCRAGEISGYMPYEGWLSLINSDYGRE
MTMPSDPTQAPRKDDPIFDARQTGFLAADPIAASPVTPDLAPAAPQDAARASEQPVGRQQ
AAIPQAAPPVGRPKSFGFQDQPLYPDSPQTVTTELVAKLNEATAQFNLAAQRLEAASQHM
DQAVAKLDEAIRRFDDSSWDNNHQETLF
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaataatcaggtcatcgtatccactgacggcagcgccttggcgaaccctaacggagcc
atgggatggggatgggcggagcacgtccccgcggggaggaaaccgatcgcgtccaccgga
caggattgcgactgcggcggggccagcaacgggaccaatcagatcggcgagctttccgcg
gtcctccaagcgctgcgcacccaccggggctcttatcccctgctcatcgaaaccgattcc
caatacgccatcaactgctccaccaagtggatccatggctggaagaagaacggatggaag
aattccaagaaggagccggtcaaaaattcggacctgatcaaggccattgatggtgagatc
cgctcgcgggcgggaaaggtatccttcacctgggtcaaaggacacgccggggatttctac
aatgaaaaggtcgacgatcttgctcgcggtttcgcggaaaagtgccgggcaggcgagatc
agcggctacatgccttatgaaggatggctttctttgatcaattccgactatggccgcgag
atgactatgccaagcgatccaacacaggctccgcggaaagacgacccgattttcgacgct
cggcagacaggattcctggccgctgacccgatcgccgcatccccggttactcctgacctg
gcacctgccgctccgcaagacgccgctcgtgcatccgaacagccggtcggcagacagcaa
gccgctatcccacaagcggcaccccctgtcgggcggccaaaatcttttggattccaggac
cagcccctctaccctgacagtccgcaaacggtcaccaccgagctggtggccaagctcaat
gaagccaccgcccaattcaatctggccgcccagcgactggaggccgccagccagcatatg
gaccaggccgtggccaagcttgacgaggccatccgccgctttgacgatagcagttgggat
aataaccatcaggaaacattgttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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