KEGG   Penicillium digitatum: PDIP_00930
Entry
PDIP_00930        CDS       T04849                                 
Name
(RefSeq) Flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pdp  Penicillium digitatum
Pathway
pdp03030  DNA replication
pdp03410  Base excision repair
pdp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PDIP_00930
   03410 Base excision repair
    PDIP_00930
   03450 Non-homologous end-joining
    PDIP_00930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdp03032]
    PDIP_00930
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_00930
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdp04147]
    PDIP_00930
DNA replication proteins [BR:pdp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PDIP_00930
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PDIP_00930
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PDIP_00930
Exosome [BR:pdp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PDIP_00930
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 26228416
NCBI-ProteinID: XP_014538842
UniProt: K9H567
Position
Unknown
AA seq 395 aa
MGIKHLYQVISENAPDAIKTGEIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGET
TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRVARKAEAAEAHEEAKETGTA
EDIEKFSRRTVRVTREHNAECKKLLGLMGIPFINAPTEAEAQCAVLARAGKVYAAASEDM
DTLCFESPILLRHLTFSEQRKEPIQEIHLDRALEGLDMDRPQFIDLCILLGCDYLEPIPK
VGATTALSLIKEHKSLEKVLEFMKNDPKKKFVVPEDWPYEDARELFSNPDVRPADHAECD
FKWEAPNVEGLIEYLVGDKGFNEDRVRNGAARLSKHLKTAQQSRLEGFFKPVARTEDEKA
SLKRKHDEKLLQQKKKKKEDAKAKKDAKAKPRGAA
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgggtattaagcacctgtaccaggttatctccgagaatgcccccgatgcgatcaagacg
ggcgaaatcaagaaccacttcggccgcaaggtcgcgattgatgcgtcgatgagcatctac
agtttcctgatcgccgtgcgctcggagggtcaacagctcatgagtgagtcaggtgagacc
acatcccacctgatgggcatgttctaccgtacactccggatggtggataacggcatcaaa
cctctctatgttttcgacggagccccgccgaaactcaagtccggtgaattggcgaagcgt
gttgcacgcaaggctgaagcagccgaagcccatgaagaggcgaaagaaaccggaactgcg
gaagacatcgaaaaattctcacgacggactgtccgcgtcacccgtgaacataatgcagag
tgcaagaagctccttggactgatgggaattcctttcattaacgcaccgacggaagccgaa
gcccagtgtgccgtcctggctcgtgcgggtaaggtgtatgcagctgcgtccgaagacatg
gatacattgtgttttgagtcgccgattctcctgcgccacctgacattcagtgagcagcgc
aaggaacctatccaagaaatccacttggatcgcgcacttgagggtcttgatatggaccgc
ccacagttcatcgatctctgcattcttctcggctgtgactacctggagcctattcccaaa
gtgggagccaccactgctctcagcctcatcaaggagcacaagtctctggagaaagtcctg
gagttcatgaagaatgacccaaagaagaagttcgtagttcctgaagactggccctacgag
gatgcgcgagagctgttttccaacccagacgtccggcctgccgatcacgccgaatgcgac
ttcaagtgggaagctcccaacgtcgagggcctgattgagtatctggttggagacaagggc
ttcaatgaagaccgtgtgcgcaacggggccgcccgtctctcgaagcacctcaagaccgcc
caacaatcccggctggagggattctttaagcccgtcgcccgcactgaagatgagaaagca
tctctcaagcgcaagcacgacgagaagctgctgcagcaaaagaagaaaaagaaggaagat
gccaaggctaagaaggatgccaaggcgaaaccgcgtggggcagcctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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