KEGG   Penicillium digitatum: PDIP_35060
Entry
PDIP_35060        CDS       T04849                                 
Name
(RefSeq) RNA polymerase II subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
pdp  Penicillium digitatum
Pathway
pdp03020  RNA polymerase
pdp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PDIP_35060
  09124 Replication and repair
   03420 Nucleotide excision repair
    PDIP_35060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdp03021]
    PDIP_35060
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_35060
Transcription machinery [BR:pdp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PDIP_35060
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PDIP_35060
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 26231824
NCBI-ProteinID: XP_014535338
UniProt: K9GP94
Position
Unknown
AA seq 335 aa
MDYEMDLEPTGPQVTVREAEPYRVDFRLTAVDLAFANSLRRTILAEVPTLALDLIEIESN
TSVLPDEFLAHRLGMIPLNSYNCDQDLDYTRDCDCEDHCVRCSVTLSLHARCGSGIMSVY
ARDLIVVGERINDKIGDPVTTDPENKGPLICKLRKGQEIKMTCLAKKGTAKEHAKWAPTA
AVGFEYDPNNNLRHVDYWYEQDAAKEWPISENAAWEPAANPDQPFDYDAEPNCFYFDVES
IGNLEPDMIIQQGIVSLQRKLATTVSVLLGEGEDGHAGGAEDAEMMGANDPDAYEPPEGI
DGNMTAYGNGAASAWGASAQTPYGATPYGQSSYGF
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggattacgaaatggatctcgagcccacagggccccaagtcacagtccgcgaagcggag
ccctaccgcgtcgacttcaggctgaccgcagtcgacctcgcattcgccaactccctccga
cgaaccatcctcgccgaagtgcccactctggcactcgacctgatcgaaatcgaaagcaac
acttctgttctccccgatgaattcctcgcccaccgcctcggtatgatccccttgaactcg
tacaactgcgaccaagacctcgactacacacgagactgcgactgcgaagaccactgtgtg
cgctgcagcgtgacgctgtctctgcacgcgcgctgcggtagcggcatcatgtctgtttac
gcacgggatctgattgtcgttggcgagcgaattaacgataagattggcgatccggttacc
actgacccggagaacaagggtcccttaatctgtaagctgcggaaaggacaggagattaaa
atgacttgtctggcaaagaagggaactgctaaggagcatgccaagtgggcgcccactgcc
gcagtcggctttgaatatgatcccaacaacaacctccgccatgtggactactggtatgag
caggatgcggcgaaggaatggcctatctcggaaaacgctgcctgggaacccgctgccaac
cccgaccagcccttcgactacgatgctgaacctaactgtttctactttgacgtggagagc
atcggtaacctcgagccagatatgattatccagcagggtatcgtgtcgctccagcgcaaa
ctcgcaaccaccgtgtctgtcctcttaggcgaaggcgaggatggacacgccggaggcgct
gaagatgccgagatgatgggtgccaatgaccctgatgcttatgagccacccgagggcatt
gacggaaacatgactgcatacgggaacggtgcggctagtgcttggggcgctagtgcacag
acaccgtacggtgctacgccttacgggcagagcagctatgggttctaa

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