KEGG   Polynucleobacter duraquae: CL55_00005640
Entry
CL55_00005640     CDS       T04207                                 
Name
(GenBank) porphobilinogen deaminase
  KO
K01749  hydroxymethylbilane synthase [EC:2.5.1.61]
Organism
pdq  Polynucleobacter duraquae
Pathway
pdq00860  Porphyrin metabolism
pdq01100  Metabolic pathways
pdq01110  Biosynthesis of secondary metabolites
pdq01120  Microbial metabolism in diverse environments
pdq01240  Biosynthesis of cofactors
Module
pdq_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pdq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    CL55_00005640
Enzymes [BR:pdq01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.61  hydroxymethylbilane synthase
     CL55_00005640
SSDB
Motif
Pfam: Porphobil_deam Porphobil_deamC
Other DBs
NCBI-ProteinID: AKD24897
UniProt: A0A0E3ZLF3
Position
541798..542778
AA seq 326 aa
MSQTPIFSPIASNSGTPERLVIATRESRLAMWQAEHVRDCLKKLYPACDVQILGMTTRGD
QILDKALSKVGGKGLFVKELETALEDGRADLAVHSLKDVPMVMPEGFDLSCVMVREDAHD
AFVSNDYASLEDLPKGAVVGTSSLRRESVLRSRFPHLVIQPLRGNLDTRMGKLDRGEYQA
IILAAAGLKRLGLGSRIRALLPIDPYTPAAGQGALGIETLAQHPRIREWLAPLNDLPTLF
AVTAERMVSRQLGGSCEVPLAAYATWDKDHMNIRSFVASVDGTASCLASAQGAVKSLEDA
EALGLLVAQDLIAQGAERLLPNGLPK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtcccaaacacctatttttagccctatagcctccaactctggtactcctgagcgcctt
gtaattgccacccgtgagagtcgtctcgctatgtggcaggctgaacacgtccgagattgc
cttaaaaagctctatccggcatgcgatgtacagatcctgggtatgactacccgaggagat
caaatactggataaagccctttctaaggtaggtggcaagggcttatttgtaaaagaactc
gagactgccctagaagatggtcgggcagatttggcggtgcattctttgaaagacgttccc
atggtcatgccagagggctttgatctgtcctgtgtcatggtgcgggaagatgcccatgat
gcatttgtttctaatgactatgctagtttggaagatttgccaaagggtgcggtagtgggc
acttcaagtttgcgacgagaatctgttctgagatccagatttccgcatttggtgattcag
cccttgaggggaaatttagatacccgtatgggtaagctcgatcgtggcgagtatcaggca
atcattttggcggcagcaggtctcaagcgattaggtttaggaagccgcattcgggctcta
ctgccgattgatccttacacgccggctgcgggacaaggcgctcttggtatcgaaaccttg
gctcagcatcccagaattagagagtggcttgcccctttgaacgatttgccaacactcttt
gcggtgactgctgaacgcatggtgtcgcgtcaattaggtggatcttgtgaagtacctttg
gctgcatatgccacttgggacaaagatcatatgaatatccgctcatttgtagctagtgtc
gatggcactgcaagttgcttggctagcgcccaaggtgccgtcaagagcttggaagatgca
gaggctttgggtctcttggttgcacaagacctcattgctcaaggtgctgagcgtttattg
cctaatggcctgcctaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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