KEGG   Polynucleobacter duraquae: CL55_00017100
Entry
CL55_00017100     CDS       T04207                                 
Name
(GenBank) Superfamily I DNA and RNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pdq  Polynucleobacter duraquae
Pathway
pdq03420  Nucleotide excision repair
pdq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CL55_00017100
   03430 Mismatch repair
    CL55_00017100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdq03400]
    CL55_00017100
Enzymes [BR:pdq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CL55_00017100
DNA repair and recombination proteins [BR:pdq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CL55_00017100
   MMR (mismatch excision repair)
    Other MMR factors
     CL55_00017100
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30 ResIII
Other DBs
NCBI-ProteinID: AKD26043
UniProt: A0A0E3V246
Position
complement(1664338..1666725)
AA seq 795 aa
MYSDLLANLNPEQREAVTLPPVNENGQAQSALILAGAGSGKTRVLTTRIAWLIQTGQVSP
IGVLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQIL
DTQDQLSAIKRLLKGLKVDDEKYPPKQLQYFIAHAKERGQRAKELSVGDDFQAKMAQLYE
AYDEQCQREGVVDFAELLLRSYELLKHNEAIRTHYQERFRHILIDEFQDTNALQYAWLKL
LSGHDASRVNVSGMGSSAVFAVGDDDQSIYAFRGADVENMRLYEKQYHPMMVKLEQNYRS
HGHILDTANYLISNNTDRLGKNLRTDAGHGELVRIYDAPSDHAEAAWLVDEIKALVSSGI
KRTEIALLYRSNAQSRIIEHALFSAAIPYRVYGGLRFFERAEIKHALAYLRLLENPNDDT
SFSRVVNFPTRGIGARSIEAVQDAARAQNSSLYLAASTLDGKAGASLGGFVRLVDHMREA
TRYNTLPETVEFVIQNSGLIQHYLSEREGQDRVENLQELINAATAFIAEEGYGQDATAAT
LPGENAPGVVEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTSVFITGLE
EGLFPHENSINEQHGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEEL
PCDSLKWLTPKVKDARWGGTGNGNGGRSGSTWQDGYTRQREFGSNDFFDSGNERERPARQ
IGRVGSASTAVTRMAAPPRGNYPFTIGQNVFHTKFGEGRVTGLEGNDADARAQVNFKRHG
VKWLQLSIAKLAAID
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgtactcagacctactcgcaaaccttaatccagaacaacgcgaggcagtgaccctcccg
ccggtaaatgaaaatggccaagcccagtcagccctgattttggctggcgctggcagtgga
aaaacccgcgttctcacgacccgtatagcttggttgatccaaacaggccaggtttcacct
attggcgtcctagcggtgacctttactaataaggccgctaaagagatgatgctgcgctta
agcgccatgctgcctattaacactcgaggcatgtggatcggtacttttcatggtctttgc
aaccgtttattgcgtgcgcatcacaaagaagcaggtttgccgtctacttttcagattttg
gatacccaggatcagctttccgccattaagcgccttttgaagggcttaaaggtcgatgat
gagaaatacccacctaagcagttgcaatatttcattgcccatgccaaagagcgtggtcag
cgcgctaaagaattatccgtaggggacgactttcaggcgaagatggctcaactctatgaa
gcctacgatgagcagtgccagcgtgaaggtgtagtcgactttgctgaactcttattacgt
agttatgaattgctcaaacataacgaggccattcggacgcactaccaagagcgcttccgt
catattttgattgatgagtttcaagataccaatgccttgcaatacgcttggctcaaatta
ctatctggtcatgatgcgagtcgtgtcaatgtcagcggcatgggaagtagtgcagttttt
gcggtaggcgatgatgatcaaagtatttatgcattccgcggcgcagatgtggagaacatg
cgtttgtatgaaaagcaatatcacccgatgatggtcaagcttgagcagaactaccgctca
catggccacatcttagatacggccaattacctcatttccaataatacggatcgtctaggc
aagaacttgcgtaccgatgcaggtcatggtgagctcgttcgcatctatgatgcgccgagt
gatcatgctgaagctgcatggcttgtagatgaaattaaagccctggtgagtagtggtatc
aaacgcactgaaattgccttgctctacagaagcaatgctcagtcacgcattattgagcat
gccttattttctgcagcgattccatatcgggtttacggtggactgcgcttcttcgagcgc
gcagagattaaacatgccttagcgtatttacgtctgctagaaaatccgaatgacgacacc
tccttctcgcgcgtagtgaatttcccaacacgcggtattggtgcaagatcgattgaggct
gtgcaagatgcagctcgtgcacaaaatagttctttgtatttagcggcatcgacattagac
ggtaaagctggtgcctccttaggtggctttgtacgcctggtggaccatatgcgtgaagct
actcgttacaacacattgcctgagacagtggaattcgtgattcaaaacagtggtttgatt
cagcactacctttcagagcgcgaaggccaggaccgtgtagaaaacttacaagaattaatt
aacgctgcaaccgcatttattgcagaagaaggttatggtcaggatgccactgctgccaca
ttgcctggtgagaatgcccctggcgtagtcgaggtctcgccgttggctgcatttctctcg
cacgcttcacttgaggccggtgataaccaggcccaggcaggccaagatgctgtgcagctg
atgacagtgcactctgctaaaggcttggagttcacctctgtatttattactggcttagaa
gaggggttattcccacatgagaacagtattaatgagcagcatggtttagaagaagagcgt
cgcttaatgtatgtggcgattacacgcgcaaaagagcgcctctatctctctcacacacag
tcacggatgttgcacggtcaagttcgctacaacatgccatctcgcttcttagaagagttg
ccatgtgattcgctgaagtggctcactccaaaagtcaaagatgcccgttggggtggtact
ggcaatggaaatggcggtcgctcagggtcaacttggcaagatggctatacacgtcagcgt
gagtttggatcgaatgatttctttgacagtggtaatgaacgcgagcgacctgcaaggcaa
attggccgagtaggctctgcctcaaccgccgtaactagaatggccgcaccaccacgagga
aattacccatttacgattgggcaaaatgtattccacaccaagtttggtgaggggcgcgtt
acaggcctagagggtaatgatgctgatgcgcgcgctcaggtaaatttcaagcgccatggc
gtgaaatggctgcagctcagtattgctaagcttgctgcgatcgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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