KEGG   Pseudomonas sp. ATCC 13867: H681_02115
Entry
H681_02115        CDS       T02524                                 
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:3.6.4.13]
Organism
pdr  Pseudomonas sp. ATCC 13867
Brite
KEGG Orthology (KO) [BR:pdr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdr03009]
    H681_02115
Ribosome biogenesis [BR:pdr03009]
 Prokaryotic type
  rRNA helicases
   H681_02115
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII P-loop_SecA ERCC3_RAD25_C CMS1
Other DBs
NCBI-ProteinID: AGI22305
UniProt: M4XAC0
Position
complement(467657..469033)
AA seq 458 aa
MTTSAFSSLSLSADLLANLDSLGYREMTPIQAAALPAILKGRDLIAQAKTGSGKTAAFGI
GLLSPLNPRYFGCQALVLCPTRELADQVTKEIRRLARAADNIKVLTLCGGVPFGPQIGSL
EHGAHVVVGTPGRVQEHLRRGTLKLDGLNTLVLDEADRMLDMGFYDSIADIIGQLPARRQ
TLLFSATYPEGIGQLAAKFLKNPERVEVEALHDDSQIEQHFYEIDPKQRFDAVVRLLQHF
RPQSCVAFCHTRQQCMEVVEQLNARKISALALHGDLEQRERDQVLTLFANRSCSVLVATD
VAARGLDIAALEAVINVELSRDAQVHVHRIGRSGRAGEKGLALSLVTPAEASRAQAIEDL
QGAPLNWERIDFLKANDAPLLPPMTTLAIAGGRKDKLRPGDILGALTGDAGLKGTQVGKI
AIFDFQAFVAVERDCAKQALKHFNEGRIKGRSFKARIL
NT seq 1377 nt   +upstreamnt  +downstreamnt
gtgaccacctccgcattttccagcctttccctgtcggccgacctgctggcaaacctcgac
tccctcggctaccgcgagatgactccgatccaggctgccgccctgcctgcgatcctcaag
ggccgcgacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttcggcatc
ggcctgctcagcccgctcaatccgcgctacttcggctgccaggcgctggtgctgtgcccg
acccgcgagttggccgaccaggtgaccaaggagatccgccgcctggcccgcgccgccgac
aacatcaaggtgctgaccctctgcggcggcgtgcccttcggcccgcagatcggctcgctg
gagcacggcgcccacgtggtggtcggcaccccgggccgggtgcaggagcacctgcgccgc
ggcaccctgaaactcgacggcctgaacaccctggtgctcgacgaagccgaccgcatgctc
gacatgggcttctacgacagcatcgccgacatcatcggccaactgcccgcgcgccggcag
accctgctgttctccgccacctaccccgaaggcatcggccagttggcggcgaagttcctg
aagaatcccgagcgcgtggaagtggaagcgctgcacgacgacagccagatcgaacagcac
ttctatgagatcgatccgaagcaacgcttcgatgcggtcgtacgcctgcttcagcatttc
cgcccgcaatcctgcgtcgccttctgtcatacccgccagcagtgcatggaagtggtggag
caactcaacgcccgcaagatttccgccctggccctgcacggcgacctggagcagcgcgag
cgcgaccaggtgctgaccctgttcgccaaccgcagttgcagcgtgctggtggccaccgac
gtggccgcgcgcgggctggacatcgccgcgctggaagcggtgatcaacgtcgaactgtcg
cgcgatgcgcaggtccacgtgcaccgcatcggccgtagcggccgcgccggcgagaagggc
ctggcgctgtcgctggtcacccccgccgaagccagccgcgcccaggccatcgaagacctg
cagggcgcgccgctgaactgggagcgcatcgacttcctcaaggccaacgacgccccgctg
ctgccgccgatgaccaccctggcgattgccggcgggcgcaaggacaagctgcgccccggc
gacatcctcggcgcgctgaccggcgacgccgggctcaagggcacccaggtcggcaagatc
gccatcttcgacttccaggccttcgtcgccgtggagcgcgactgcgccaagcaggcgctg
aagcacttcaacgaaggcaggatcaagggccgctcgttcaaggcgcgcatcctctga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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