KEGG   Paenibacillus durus: PDUR_03800
Entry
PDUR_03800        CDS       T03297                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
pdu  Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:pdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdu03009]
    PDUR_03800
Enzymes [BR:pdu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     PDUR_03800
Ribosome biogenesis [BR:pdu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PDUR_03800
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Methyltransf_15 MTS Methyltransf_25 Met_10 PrmA Cons_hypoth95 Methyltransf_11 Methyltransf_23 Methyltransf_12 UPF0020 eIF4G1-like_eIF4E-bd Methyltransf_32 Methyltrans_SAM N6_N4_Mtase PCMT
Other DBs
NCBI-ProteinID: AIQ11220
UniProt: A0A089HKJ6
Position
800275..801876
AA seq 533 aa
MNNNRSGRRQGRLDSKAAGVAAGLPVNKNDEVVLDIIGMTHEGEGVGRVEGYTLFVQGAL
PGEKVQAKVLKTKKQYGYAKLLELVEASASRIAPPCPIYDQCGGCQLQHMDYAAQLKWKR
QLVVDNLERIGKLDVAGDEANGEPRGEREPSGEPGERDGEAQAGAPQGGNSLEGDEAIAN
SGEPLRSGGIVVRPTLGMDEPWRYRNKAQVPIGVTDGGLVGGFYARGSHRIIDMETCLIQ
HEHNDAVVSAVKRIGQELGISAYNEETGRGLLRHVIVKKAFRTGEMMLVLVTNGRDIPHF
DAWIGSIREELPDVVSICQNVNTQRTNVIFGGETRVLWGRDVIYDYIGDVQFAISARSFY
QVNPAQTEVLYGKTVEYAGLTGRETVIDAYCGIGTISLFLAQHADKVYGVEIVREAIEDA
RSNAKLNNMNNVVFEVGASEDVIPNWKEQGITADVIVVDPPRKGCDPRLLETILEMKPER
VVYVSCNPSTLARDLRVLEDGGYRTVEVQPVDMFPWTVHVESVALLVWNETEN
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgaataataaccgcagcggccgccgtcaaggccgcctggacagtaaggcggcgggagtc
gccgccgggctgcctgtaaataaaaacgatgaggtcgtgctggatatcatcggcatgacg
catgaaggcgaaggggtaggccgggtagagggctataccctttttgtgcagggggcgctt
cccggagagaaagtccaggccaaggtgctcaagacgaagaagcagtacggatacgccaag
ctgcttgagcttgtagaggcaagcgcttcccgcatcgcgccgccctgcccgatctatgac
caatgcggcggctgccagctgcagcatatggactatgctgcgcagctcaagtggaagcgg
cagcttgtagtggacaacctggagcggattgggaagttggatgtggcgggggatgaagcg
aacggagagccgcggggcgaacgggagccgagcggggagccgggtgagcgtgatggtgaa
gctcaggcgggagcgccgcagggagggaattcgctggaaggcgatgaagcgatcgccaac
tccggcgagcccctccggagcggcggaattgtggtgcggccgacgctcggtatggacgag
ccctggcgctaccgcaataaagcgcaggtgccgatcggcgttaccgacggtggactagtc
ggcggcttttacgcgcgcggcagccaccggattatcgacatggagacctgtctgattcag
catgagcataacgacgccgtcgtatcggccgtcaagcgaatcggccaggagctcggcatc
tccgcatataatgaagaaaccggccgcggcctgctgcggcatgtcatcgtcaagaaggcg
ttccgtaccggagagatgatgctggtgctggtgacgaacggacgggatatcccgcatttt
gacgcctggatcggcagcatccgggaggaactcccggatgtcgtgagcatctgccagaac
gtcaatacgcagcggacgaacgttatttttggcggcgagacccgcgtattgtggggcaga
gacgtcatctatgattatatcggcgatgtgcagttcgccatttcggcgcggtctttttac
caggtgaacccggcgcagaccgaagtgttgtacggcaaaacggtcgaatacgccggactg
accggccgcgaaaccgtcatcgacgcttactgcggcatcggcacgatttccctgttcctc
gcgcagcatgcggacaaggtatacggtgtcgaaatcgtccgcgaagccatcgaggatgcg
cggtcgaacgcaaagcttaacaacatgaacaatgtagtgttcgaggtcggcgcatccgaa
gacgtcattccaaactggaaagagcagggcatcactgccgatgtcatcgtcgtcgatccc
ccacgcaaaggctgcgatccccgcctgctggagacgatcctggaaatgaagcccgagcgg
gtggtgtatgtgtcctgtaatccgtccaccctggcaagggatttgcgggtgttggaggat
ggtgggtatcggaccgtcgaggtgcagccggtggatatgtttccgtggacggtgcatgtg
gaatcagttgctttattagtatggaatgaaacagagaactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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