KEGG   Paenibacillus durus: PDUR_24965
Entry
PDUR_24965        CDS       T03297                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pdu  Paenibacillus durus
Pathway
pdu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PDUR_24965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdu03400]
    PDUR_24965
DNA repair and recombination proteins [BR:pdu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PDUR_24965
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PDUR_24965
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_16 AAA_29 RsgA_GTPase BCA_ABC_TP_C nSTAND3 DnaJ_CXXCXGXG AAA_21 AAA_25 ATPase cobW Viral_helicase1
Other DBs
NCBI-ProteinID: AIQ14765
UniProt: A0A089HVH4
Position
complement(5429188..5432061)
AA seq 957 aa
MANENIVIKGARAHNLKNIDVTIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPDHGIEITSQTVEQMVDRIMQYPEKTRLQILAPVITGRKGEHKSLFAEISKQGFVRVR
VDGELRDLSEDIELEKNKKHTIEVVVDRIVIKEDVESRLTDSIETALKLSGGKILVDIIG
QEELLFSSSFACPVCGFSMEELAPRMFSFNSPFGACPECDGLGAQMVVDPDLLIPDAGKS
IEDGAFLAWTGSTSNYYPQFLKSVCQHFHIPENVPVSELTPEHMNKLLHGTGSEKIHFRY
ENDFGQRKEAMVPFEGIIPNLERRYRETASDGIREFIEGFMSAKPCPVCKGKRLKREILA
VTVGEKNIAEVTDLSIGDSQRFFSDLTLSEKETAIAKLILKEISSRLGFLVNVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISTLAHMRDLGNT
LIVVEHDEDTMLASDYIIDIGPGAGIHGGKVMAQGTPQEIMNDPNSLTGEYLSGRKFIPV
TSDRRESDGRWLEIRGAKENNLKNVNVKIPLGVFTAVTGVSGSGKSSLVNEILYKSLAKE
LNKAVKVRPGQHKEIRGLAHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDLFSKTNEA
KVRGYQKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYK
GKNIADVLEMTVEDGTEFFQNIPKIHRKLQTLLDVGLGYIKLGQPGTTLSGGEAQRVKLA
SELYRRSTGKTLYILDEPTTGLHVDDIGRLLEVLHRLVESGESVLVIEHNLDVIKTADYI
VDMGPEGGSGGGTVIAFGTPEQIIQVPESYTGKYLKPILLRDTARTEALMLQASKAQ
NT seq 2874 nt   +upstreamnt  +downstreamnt
ttggcgaacgaaaacatagtaatcaaaggcgcaagggcgcataatctcaaaaatatcgac
gtgacgataccgcgcgaccggttcgttgtcctgacggggctgagcggctccggcaagtcg
tcgctggctttcgataccatttatgccgaaggacagcggcgctatgtggagtcgctgtca
gcttatgcgcggcagttcctcggccaaatggagaagccggatgtcgattccatcgacggt
ttgtccccggccatttccatcgaccagaagacgacaagccgcaacccgcgttccaccgta
ggaacggtgacggagatttacgactatctgcgcctgctgttcgcgcgggtcggacatccc
cactgcccggaccacggcattgagattacctcgcagacagtcgagcagatggtcgaccgg
attatgcagtacccggagaagacgagactacagattctcgcaccggtcataacaggccgc
aaaggcgagcataagagcctgtttgcggaaatttcgaagcagggcttcgtccgtgttcga
gtcgacggtgagctgcgcgatttatccgaggacattgagctcgagaagaacaagaagcac
acgattgaagtcgtggtcgaccggatcgtcatcaaggaagatgtggagtcccgtctgacg
gattccatcgagacggctttaaagctgtcaggcggcaaaattctcgtcgacatcatcggc
caggaggaactgctgttcagctccagcttcgcctgtcccgtatgcggcttcagcatggaa
gagctggcgccgcgcatgttctcctttaacagcccgttcggggcttgcccggaatgcgac
ggtcttggggctcagatggtggtcgatcccgatctgctcatcccggatgccgggaagtcc
atcgaagacggagcttttttagcgtggacgggcagcacatccaactattacccgcagttt
ctgaagtcggtatgccagcactttcatattcccgagaatgtgccggtaagcgaactgacg
ccggagcatatgaacaagctgctccacggtacgggaagcgagaaaatccatttccgctat
gagaatgattttgggcagcggaaggaagcgatggtccctttcgaaggcattattccgaac
cttgagcgccgttaccgtgagacggcgtctgatggcatacgcgaattcatcgaaggcttc
atgagcgccaagccatgccccgtatgcaaaggcaaacggctgaagcgtgaaatcctcgct
gtgacggtaggcgaaaagaacatagccgaagtaaccgatctgtcgatcggggacagccaa
cgttttttcagcgaccttaccttaagcgagaaagaaacggctattgccaaactgattcta
aaggagattagcagtcgtctcggttttctcgtcaatgtcggtctcgattatttgacgctc
agccgttcggcaggcacgctgtccggcggggaggcccagcgcatccggctggcgacacag
atcggttccagcttaatgggcgtgctgtacattctggacgagcccagcatcggcctgcac
cagcgggacaatgaccggcttatttcgacgcttgcgcatatgcgcgatctcggcaacacc
ctgatcgttgtcgagcatgacgaagatacgatgctggcgtcggactatattatcgacatc
ggtcccggagcgggtattcatggcgggaaagtgatggcccagggaacgccgcaggaaatc
atgaacgatcccaactctctgaccggcgaatacctcagcggacgcaaattcatcccggtc
acctccgaccggcgcgagagcgacggtcgctggctggaaatccggggggccaaggaaaat
aacctcaagaacgtgaacgtcaaaattccgctcggcgtctttacggcggtaaccggcgta
tcggggtcaggcaagtcatcgcttgtcaacgaaattctctacaagagtctggccaaagaa
ctgaacaaagcggttaaggttcgcccgggccaacataaagaaatacgcggccttgcgcat
ttggacaaagttattgatatcgaccagtcgccgatcgggcgtacgccgcggtccaatccg
gcaacctatacgggagtgttcgacgacatccgcgacctgttctccaagacgaatgaagcg
aaggtaagaggctatcaaaaagggcgtttcagcttcaacgtcaagggtggacgctgcgaa
gcgtgccggggcgacggcattatcaagattgaaatgcactttctgccggatgtctacgtt
ccctgcgaggtctgcaagggcaaacgttacaaccgcgagacgctcgaagtgaagtacaaa
gggaagaacatcgccgatgtgctggagatgacggtagaggatggaacggaattcttccag
aacataccgaaaattcatcgcaagctgcagactctgctcgatgtcggtcttggctatatc
aagctgggtcagccgggcacgaccctttccggcggggaagcgcagcgtgtgaagctggcg
tcggagctgtaccgccggagtacgggcaagacgctgtatatactggacgagccgactaca
ggactgcatgtggacgatatcggccgcctgctggaagtgctgcaccgcttggttgaatcc
ggcgaatccgtactcgttatcgagcataacctggacgtaatcaagacggctgattatatc
gtcgatatgggaccggaaggcggcagcggcggcggaacggtgatcgcattcggcaccccg
gaacaaatcatccaggtgcctgaatcgtacacgggcaaatacctgaagccgattctgctt
cgggatacggcgcggacggaggcgctgatgctccaagcctcgaaggcacaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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