KEGG   Pseudonocardia dioxanivorans: Psed_0327
Entry
Psed_0327         CDS       T01479                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pdx  Pseudonocardia dioxanivorans
Pathway
pdx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pdx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Psed_0327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdx03400]
    Psed_0327
DNA repair and recombination proteins [BR:pdx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Psed_0327
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AEA22600
UniProt: F4CQK2
Position
complement(372417..373409)
AA seq 330 aa
MRAMWSGAVSFGLVSVPVKLYSATTNHDIRFHQVHATDGGRIRYKRTCSIDGEEVEYADI
VKGYETEDGELITLDESDLDSLPVATGHEIDVIEFVPSDQIDPLLFDKSYYLEPETKAAK
PYALLREALTDTDRMAVVKVALRQRETLALLRVRGKAIVLQTMLWPDEVREPEFDILDAD
VELRPQELQMAASLVESLGADFEPSDFTDEYRDAVAEMIDRKRTTGDTRPAPVEEKPADD
GDSMTDLLTALQRSVEAARGGPAKKADTAAGSDETPAPEKAPEKAPEKAGPEEEEKPKTR
ARRSTKKGKAAGDDTAAEETAPRRRTRKPA
NT seq 993 nt   +upstreamnt  +downstreamnt
atgcgtgcgatgtggagcggagcggtttcgttcgggctggtcagcgtgccggtgaagctg
tactccgcgacgaccaaccacgacatccggttccaccaggtgcacgccaccgacggtggt
cggatccgctacaagcggacctgctcgatcgacggcgaggaggtcgagtacgccgacatc
gtcaagggctacgagaccgaggacggcgagctgatcacgctcgacgagtccgacctcgac
tcgctgccggtggccaccgggcacgagatcgacgttatcgagttcgtgccgtccgaccag
atcgacccgctgctgttcgacaagagctactacctggagccggaaaccaaggccgccaag
ccctacgcgctgctgcgcgaggcgctcaccgacaccgaccggatggcggtggtcaaggtg
gcgctgcggcagcgcgagacgctggcgctgctgcgcgtgcggggcaaggcgatcgtcctg
cagacgatgctgtggcccgacgaggtccgcgagccggagttcgacatcctcgacgccgac
gtcgagctgcggccccaggagctgcagatggcggcctcgctcgtcgagagcctcggtgcc
gacttcgaaccgtcggacttcaccgacgagtaccgcgacgccgtcgcggagatgatcgac
cgcaagcggaccaccggcgacacccggcccgcgccggtcgaggagaagccggccgacgac
ggcgacagcatgaccgacctgctcacggccctgcagcgcagcgtcgaggcggccaggggc
gggccggcgaagaaggccgacaccgccgcgggcagcgacgagacgccggccccggagaag
gccccggagaaggccccggagaaggccgggcccgaggaagaggagaagcccaagacccgc
gcccgccggtcgacgaagaagggcaaggccgccggggacgacacggccgccgaggagacc
gcgccgcgcaggcggacgcgcaagcccgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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