KEGG   Pseudonocardia dioxanivorans: Psed_2012
Entry
Psed_2012         CDS       T01479                                 
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
pdx  Pseudonocardia dioxanivorans
Pathway
pdx03030  DNA replication
pdx03430  Mismatch repair
pdx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Psed_2012
   03430 Mismatch repair
    Psed_2012
   03440 Homologous recombination
    Psed_2012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdx03032]
    Psed_2012
   03400 DNA repair and recombination proteins [BR:pdx03400]
    Psed_2012
Enzymes [BR:pdx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Psed_2012
DNA replication proteins [BR:pdx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Psed_2012
DNA repair and recombination proteins [BR:pdx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Psed_2012
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delta_C DNA_pol3_gamma3 DMPK_coil
Other DBs
NCBI-ProteinID: AEA24239
UniProt: F4CWY4
Position
2144900..2145928
AA seq 342 aa
MWEAGHGCGPSWATMVDVTPAASDGRPEPVNLVIGEEELLAERAVQEVVVRARAADPETE
VRRLRTSEVDAQELAEHLSPSLFAEGRVVVLSAAQEAGKDMVAAVLRYAAEPADGIVLVL
QHQGGARGKSFADDLRKAGAAVTRCERLTRPAERADFVRAEVRRLGGKITGDAVDVLLEA
VGSELRELASAAGQLVADTGGVVDEKAVRRYHRGRAEATGFTVADKVVAGDREGALEALR
WALVLGVAPVLVADALADAVRTLAKVGAAGRGDPNRLAGTLGMPPWKIRKAQGQVRSWRP
EGLTVAFAAAAEANADVKGAAADPEFALERAVRRIIDARDIR
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgtgggaggcgggtcacggctgcggcccgtcgtgggcgacgatggtggacgtgacccca
gccgcctcggacggccgccccgagcccgtcaacctcgtcatcggcgaggaggagctgctc
gccgagcgggccgtgcaggaggtcgtcgtccgggcgcgcgcggccgaccccgagaccgag
gtccggcggctgcgcaccagcgaggtcgacgcccaggagctggccgagcacctcagcccg
tcgctgttcgccgaggggcgcgtggtcgtcctctccgcggcgcaggaggcgggcaaggac
atggtcgccgccgtacttcgctacgccgccgagcccgccgacgggatcgtgctggtcctg
cagcaccagggtggtgcccgtggcaagtccttcgccgacgacctgcgcaaggccggagcg
gccgtcacccgctgcgagcggctgacccgcccggccgagcgggccgacttcgtcagggcc
gaggtccgccggctcggcgggaagatcaccggcgacgcggtcgacgtgctgctcgaggca
gtcggttcggagctgcgggagctggcatcggcggccggccagctggttgcggacaccggc
ggggtcgtcgacgagaaggccgtccggcgctaccaccgcggccgggccgaggcgacgggg
ttcaccgtcgcggacaaggtcgtggccggcgaccgcgagggcgcgctggaggcgctgcgg
tgggcgctggtgctcggcgtcgcgccggtgctcgtcgccgacgctctcgccgacgccgtc
cgcaccctggcgaaggtcggtgcggccggacgcggcgaccccaaccggctcgccgggacc
ctcgggatgccaccgtggaagatccgcaaggcgcaagggcaggtgcggtcgtggcggccg
gaggggctcaccgtcgcgttcgcggccgccgccgaggccaatgccgacgtcaagggcgcg
gccgccgacccggagttcgccctggagcgcgcagtgcgtcgcatcatcgacgcccgcgac
atccgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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