KEGG   Pseudonocardia dioxanivorans: Psed_3845
Entry
Psed_3845         CDS       T01479                                 
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
pdx  Pseudonocardia dioxanivorans
Pathway
pdx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Psed_3845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdx03400]
    Psed_3845
DNA repair and recombination proteins [BR:pdx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Psed_3845
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Psed_3845
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 AAA_16 AAA_25 RsgA_GTPase nSTAND1 AAA_21 AAA_33 APS_kinase AAA_22 AAA_18 NACHT DnaJ_CXXCXGXG Viral_helicase1 NTPase_1 cobW ScfRs ExoX-like_C
Other DBs
NCBI-ProteinID: AEA26013
UniProt: F4CN00
Position
complement(4109543..4112455)
AA seq 970 aa
MADRLVVRGAREHNLRGVDLDIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGVPH
CPVCGHVIEKQTPQQIVDQVLAMTEGTRFQVLAPVVRTRKGEFVDLFTTLQAQGYSRVLV
DGTVHPLSDPPKLKKQEKHDIAVVVDRLVVRPSSKQRLTDSVETALRLADGLVVLEFVDL
EAGDPQRERRFSERMACPNGHPLGLDELEPRTFSFNSPYGACPTCSGIGTRKEVDPELVV
PDPEKSLADGAIAPWAGGHTSEYFGRLLGGLAGTIGFRMDTPWRKLDDAARKAVLHGTDD
QVHVRYRNRYGRERSYYANFEGVIPFLERRLDQTESESQRERYEGYMRDVPCPACKGARL
KPEVLAVTLEHRDQGDRSIAEVSAMSVAECSAFLDGMVLDARQAMIAGRVLKEVQARLGF
LLDVGLDYLSLDRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLID
TLTRLRDLGNTLIVVEHDEDTIRAADWAVDIGPGAGEHGGHIVHSGSVAGLESHDTSLTG
AYLSGRRSIPVPARRRPLDRKRTLTVVGAREHNLRGIDVEIPLGGLVAVTGVSGSGKSTL
VNDILATVLANRLNGARQVPGRHTRINGVEELDKLVRVDQSPIGRTPRSNPATYTGVWDK
IRTLFASTTEAKVRGYQAGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTVADVLDMPIEEAAEFFEPISSISRYLKTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLASELQKRSNGRTIYILDEPTTGLHFEDIRKLLLVINGLVDKGNSVVVIEH
NLDVIKTADWVVDMGPEGGSGGGTVVAEGTPEQVAAVEGSYTGQFLRGLVTPEVPKKVRR
PARRKAAAAS
NT seq 2913 nt   +upstreamnt  +downstreamnt
gtggcggatcgtctcgtcgtgcgaggcgcgcgcgagcacaacctgcgcggggtcgatctc
gacatcccgcgcgacagcctcgtggtgttcacgggcctgtccggctcggggaagtcgagc
ctggcgttcgacacgatcttcgccgagggccagcggcgctatgtcgagtcgctgtcggcg
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgaggggctc
tccccggcggtgtcgatcgaccagaagtcgacgaaccgcaacccccgctcgacggtgggc
acgatcaccgaggtctacgactacctgcggctgctctacgcgcgcgcgggcgtcccgcac
tgcccggtgtgcgggcacgtcatcgagaagcagacgccgcagcagatcgtcgaccaggtc
ctcgccatgacggagggcacccgcttccaggtgctggcgcccgtcgtgcgcacccgcaag
ggcgagttcgtcgacctgttcaccaccctgcaggcgcagggctactcgcgggtgctcgtc
gacggcacggtgcacccgttgtccgacccgccgaagctcaagaagcaggagaagcacgac
atcgcggtggtcgtcgaccggctggtcgtgcggccgtcgtcgaagcagcggctcaccgac
tcggtcgagacggcgctgcgcctggccgacgggctcgtcgtgctcgagttcgtcgacctg
gaggccggcgacccgcagcgggagcgccgcttctccgaacggatggcgtgccccaacggc
cacccgctgggcctcgacgagctcgagccccgcacgttctccttcaactcgccctacggc
gcgtgcccgacctgcagcggcatcggcacgaggaaggaggtcgaccccgagctcgtcgtc
cccgaccccgagaagagcctggccgacggcgcgatcgcgccctgggcgggcgggcacacc
tcggagtacttcgggcggctgctgggcgggctcgccggcaccatcgggttccggatggac
accccgtggcgcaagctcgacgacgcggcccgcaaggccgtcctgcacggcaccgacgac
caggtccacgtccgctaccgcaaccggtacggccgggagcgcagctactacgcgaacttc
gagggcgtcatcccgttcctggagcgccggctcgaccagacggagtcggagtcgcagcgc
gagcgctacgagggctacatgcgcgacgtgccctgccccgcctgcaagggcgcgcggctc
aagcccgaggtcctcgccgtcacgctcgagcaccgcgaccagggcgatcggtcgatcgcc
gaggtctcggcgatgtcggtggccgagtgctcggcgttcctcgacgggatggtcctcgac
gcgcgccaggcgatgatcgccggccgggtcctcaaggaggtgcaggcgcggctcggcttc
ctgctcgacgtcgggctcgactacctctcgctcgaccgcgccgccggcacgctctccggc
ggcgaggcgcagcggatccggctcgcgacgcagatcgggtccggcctggtcggcgtgctc
tacgtgctcgacgagccgtcgatcggcctgcaccagcgcgacaaccgccggctgatcgac
acgctgacccggctgcgcgacctcggcaacaccctgatcgtcgtcgagcacgacgaggac
acgatccgcgcggccgactgggccgtcgacatcggaccgggcgcgggcgagcacggcggc
cacatcgtccacagcggatcggtcgcaggcctcgagtcgcacgacacgtcgctgaccggc
gcctacctgtcgggtcgccggagcatcccggtgccggcccggcgccgcccgctcgaccgc
aagcggacgctcacggtcgtcggcgcccgggagcacaacctgcgggggatcgacgtcgag
atcccgctcggcgggctcgtcgccgtcaccggtgtctccgggtcgggcaagtccaccctg
gtcaacgacatcctcgcgaccgtgctcgcgaaccggctcaacggtgcccgccaggtgccc
ggccggcacacccggatcaacggggtcgaggagctcgacaagctcgtccgggtcgaccag
tcgccgatcggacgcaccccgcgctccaaccccgccacctacaccggcgtgtgggacaag
atccgcacgctgttcgcgtcgacgaccgaggccaaggtgcgcggctaccaggccgggcgg
ttctccttcaacgtcaagggcggccgctgcgaggcgtgctccggcgacggcacgatcaag
atcgagatgaacttcctgcccgacgtgtacgtgccctgcgaggtctgccacggcgcccgg
tacaaccgggagaccctcgaggtccactacaagggcaagacggtcgccgacgtcctcgac
atgccgatcgaggaggccgccgagttcttcgagccgatctcctcgatcagccgttacctg
aagacgctggtcgacgtgggtctcggctacgtccggctgggccagcccgcgccgacgttg
tcgggcggtgaggcgcagcgcgtcaagctcgcgagcgagctgcagaagcggtccaacggc
cggaccatctacatcctcgacgagccgacgaccggcctgcacttcgaggacatccgcaag
ctgctgctggtgatcaacggactggtcgacaagggcaactcggtcgtcgtcatcgagcac
aacctcgacgtcatcaagaccgcggactgggtcgtcgacatgggccccgagggcggctcg
ggcggtggcacggtcgtcgcggagggaacgccggagcaggtcgcggccgtcgaggggagc
tacaccgggcagttcctgcgcggtctggtgacgcccgaggtgccgaagaaggtccgcagg
cccgcccgccggaaggccgcggcggcgagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (42)   

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