KEGG   Pseudonocardia dioxanivorans: Psed_6656
Entry
Psed_6656         CDS       T01479                                 
Name
(GenBank) Deoxyribonuclease IV (phage-T(4)-induced)
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
pdx  Pseudonocardia dioxanivorans
Pathway
pdx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pdx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Psed_6656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdx03400]
    Psed_6656
Enzymes [BR:pdx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Psed_6656
DNA repair and recombination proteins [BR:pdx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Psed_6656
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AEA28744
UniProt: F4CXT8
Position
7054728..7055498
AA seq 256 aa
MLIGAHVRDDDPVGAAAERGADVVQIFLSDPQGWKKPPAHPQAEQLRSGDLTVVVHSPYV
VNVASPNNRIRIPSRKLVVQHAAEAANVGAIGLVVHGGHVTQKDDPAVGFENWRKFVERQ
QDEGGFAVPVFIENTAGGDNAMARSFDALARLWDAVGEFGVGFCLDTCHAFAAGEDLVDV
VDRAKAITGRIDLVHLNNSRDEFGSARDRHANIDSGTIDAGQLAAVAAAAGAPIVVETPA
EGQAADITFLRERLGR
NT seq 771 nt   +upstreamnt  +downstreamnt
atgctcatcggggcccacgtccgtgacgacgaccccgtcggcgccgcggccgagcgcggg
gccgacgtcgtccagatcttcctgtccgatccgcaggggtggaagaagccgccggcgcac
ccccaggccgagcagctccgctcgggcgacctcacggtcgtggtgcactcgccgtacgtc
gtcaacgtcgcctcgccgaacaaccggatccgcatcccctcgcgcaagctcgtcgtgcag
cacgcggccgaggccgcgaacgtcggcgcgatcgggctggtcgtgcacggcgggcacgtc
acgcagaaggacgacccggcggtcggcttcgagaactggcgcaagttcgtcgagcgccag
caggacgagggcggcttcgcggtcccggtgttcatcgagaacaccgcgggcggggacaac
gcgatggcccgcagcttcgacgcgctggcccggctctgggacgcggtcggtgagttcggc
gtcgggttctgtctcgacacgtgccacgcgttcgcggcgggggaggacctggtcgacgtc
gtcgaccgggcgaaggcgatcaccggccggatcgacctggtgcacctcaacaactcccgc
gacgagttcggctcggcgcgcgaccggcacgccaacatcgactccggcacgatcgacgcc
ggccagctcgcggcggtggccgcggcggcgggggccccgatcgtcgtcgagaccccggcg
gagggccaggcggccgacatcacgttcctgcgcgagcggctggggcggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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