KEGG   Phytobacter diazotrophicus: HHA33_08395
Entry
HHA33_08395       CDS       T06586                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pdz  Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:pdz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdz03019]
    HHA33_08395 (rnc)
   03009 Ribosome biogenesis [BR:pdz03009]
    HHA33_08395 (rnc)
   03036 Chromosome and associated proteins [BR:pdz03036]
    HHA33_08395 (rnc)
Enzymes [BR:pdz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HHA33_08395 (rnc)
Messenger RNA biogenesis [BR:pdz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HHA33_08395 (rnc)
Ribosome biogenesis [BR:pdz03009]
 Eukaryotic type
  90S particles
   RNase
    HHA33_08395 (rnc)
 Prokaryotic type
  rRNA processing factors
   HHA33_08395 (rnc)
Chromosome and associated proteins [BR:pdz03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HHA33_08395 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: QJF16550
Position
1758752..1759432
AA seq 226 aa
MNPIVINRLQRKLGYTFHHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLKEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaataaatcggcttcagcggaagctgggctacacttttcatcatcag
gagctgttgcagcaggcattaacgcatcgcagtgccagcagcaagcataacgagcgtctc
gaatttttaggcgactccattttaagttttgtgattgccaatgcgctatatcaccgtttc
ccgcgtgtggacgaaggtgatatgagccgtatgcgcgcaacgctggttcgcggaaacaca
ctggcggaaattgcccgtgagtttgaactgggtgaatgtctgcgcttagggcctggtgaa
ctgaaaagcggtggttttcgtcgtgaatccattctggccgataccgtagaagcgttgatc
ggtggggtattcctcgacagcgatattcagactgtcgagaaactgatcctgaactggtat
caaacacgtctggacgaaatcagtccgggtgataaacaaaaagatccaaaaacccgtttg
caggaatttttgcagggtcgccacctcccactgccgtcttatctggtggtgcaggtgcgt
ggtgaagcacacgatcaggaattcactatccactgccaggtcagtggcctgaaagaaccg
gtagtaggcacaggttcaagccgccgtaaggcagagcaggccgcagccgaacaggcgctg
aaaaaactggagctggaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system