KEGG   Phytobacter diazotrophicus: HHA33_17655
Entry
HHA33_17655       CDS       T06586                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pdz  Phytobacter diazotrophicus
Pathway
pdz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pdz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HHA33_17655 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdz02044]
    HHA33_17655 (tssM)
Secretion system [BR:pdz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HHA33_17655 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QJF18257
Position
complement(3705386..3709000)
AA seq 1204 aa
MNSLLSILTNRILWGFLGMTALAAVIWMIGPLLSVVDSRPLESEQNRIITIAVMYFIWVQ
SHIIPRLYNAWLNRKLMDNLKSDNAPKETADHKRLNSEEQILADRFEEASQVLKKAHFNQ
PGQRGGQWTQRFSTQYLYQLPWYVVIGAPGAGKTTALVNSGLQFPLADKFGKTALRGIGG
TRNCDWWFTNEAVLLDTAGRYSTQESEQAQDASEWLKFLGLLQKYRRRQPINGVIVTVSV
ADLLTQSGDASREQALNLRKRLTELHEQLGIRFPVYVLVTKADLLKGFRAYFAGFDKAQR
DQIWGFTFPWQEGKQADFDLMGRFTQEYALLQQRLDAALPDILLHESDPKARAESYLFPQ
EFAALRPLLADYLQTLFARSNFETEFSPRGIYLASGTQEGLPFDRVMGELGRSLSLPRGN
TGDSWDSVSKEEPVPGGKGQSFFIKNLLQNVIFQEAGIAGQNRWWEMRNRAVMWAGYAAL
LVLLVVISGLWLTSYSNNKTYLQEVEAKVPGISQEIKALRERPQGDVFALLPLLNSLAAL
PQSEDFDVNSPPLTRRMGLYRGYDVSDASQALYQKALQELLLPDVASRITTWLRNDNGSD
VEYSYEALKAYQMLYQPKHYDGKFLHQWVMLNLERNLPQNMTQAQLRRLEWHLTQLLEPQ
IQSSPFAKDEALIAREQALINQQPLAARVYGRLKRLLAADENLKPVSLASLGGPQSELVF
SRKSGKSLNDGIPGLYTPDGYWQHFDKQIGTVTNALHTDDAWVLGSTVKQEDQQQTDNAV
RQLYARDFISQWDSFLSDIALNNSANLSQRINTARLLSGNSSPLRQLVVNLSQVLTLTRD
TPEEGEKKPEEGNSTSRTLNVLFGNRDNANAAPAAATAQTPEQRVTEHYAPIIELAQPLE
KGGKTIVFDDFLKQVDELYRYLTAVQDAANSGMPAPGGEAISRLQASAGRLPGGLQSMFS
NMAVGASSDTQSRELENVRKRISVEVGGFCRQAIAGRYPLVRNASSEVTPDDLARMFAPG
TGLMDSFFRDNLTSKVDTTQSPWRFMPGIDGKTLPGSEGLLAPFQQAQSIRDAFFAGGST
TPSYRVTVRTVSMDNAILNLTLDVDGQILRYSHGPQAVQLVNWPGPGGTNQVRMQLGLTN
GTTSTLVTNGAWALNRFVDKARVTPGSSSLSRQATYNVDGHQVTLEFIPGSIRNPFQLPR
FACP
NT seq 3615 nt   +upstreamnt  +downstreamnt
atgaatagtctgctttcaattctgacgaaccgcatattgtggggttttcttgggatgaca
gcgctggcagcggtgatatggatgataggtccgctgctctctgtcgttgattcacgcccg
ctggaatctgaacaaaaccgaattatcaccatcgcggtgatgtatttcatctgggtgcaa
agccacattattccgcgtctttacaacgcgtggctgaaccgcaaactgatggacaacctg
aaaagtgacaatgcgccgaaagagacggcggatcacaaacggttgaacagcgaagagcaa
atcctcgctgaccgttttgaagaagcgtctcaggtgctgaaaaaagcgcatttcaaccag
ccgggtcagcgtggcgggcaatggacccagcgtttcagcacgcagtacctgtatcagttg
ccctggtatgtcgtcattggtgcgccgggcgccgggaaaaccaccgcgctggtcaactcc
gggctgcaatttccgctggccgacaaatttggcaaaacggcgctgcgtgggattggcggt
acgcgcaactgtgactggtggtttaccaatgaagcggttctgctggacaccgccgggcgt
tacagcacccaggagagcgagcaggcgcaggatgccagcgaatggctgaaattcctcggc
cttctgcaaaaataccgtcgccgtcagcccatcaacggggtgattgtcaccgtgagcgtt
gccgacctgctcacccagtcaggcgatgcctcacgcgaacaggcgcttaatttacgcaaa
cgcctgactgaactgcatgagcaactgggcatccgttttccggtctatgtgctggtgacg
aaagcggatctcctgaaaggctttcgtgcctattttgccgggttcgataaagcccagcgt
gaccagatctggggttttaccttcccctggcaggagggcaagcaggccgattttgacctg
atggggcgttttacccaggagtacgcgttactgcaacagcgcctcgatgcggccttaccg
gatattttactgcacgagagcgatccgaaagcgagagccgaaagctacctgttccctcag
gaatttgccgcgctgcgtccgctactggccgattatctgcaaacgctgtttgcccgctcg
aactttgaaaccgaattttcaccgcgcggtatctatctggcgagcggtacccaggaaggg
ttgccgtttgaccgggtgatgggagaactgggacgttcgctctcgcttcctcgtggtaat
accggtgacagttgggatagcgtcagcaaagaggagccggtacccggcggtaaaggacaa
agcttctttatcaaaaacctgctgcaaaacgttatttttcaggaagccggtattgccggg
cagaatcgctggtgggaaatgcgcaaccgggcggtcatgtgggccggttatgccgcgctg
ctggttctgctggtggtgattagcggtctgtggctgacaagttacagcaacaacaaaacc
tatttgcaggaagtcgaagccaaagtgcctggtatcagccaggagattaaagcgctgcgc
gagcgtccgcaaggcgatgtctttgccttactgccgctgctaaacagcctcgcggcgctg
ccgcaaagtgaggacttcgatgttaacagcccgccactgacccgccgtatggggctgtat
cgtggctatgacgtctctgacgcatcgcaggcgttgtaccaaaaagcgttgcaggagttg
ctgttaccggatgtggcgtcacgcatcaccacctggctgcgaaatgataacggcagcgat
gtggaatacagctacgaagcgttaaaagcgtatcagatgctctaccagccgaaacattat
gacggcaagttcctgcatcagtgggtcatgctcaacctggagcgcaatctgccgcagaac
atgacgcaggcccagcttcgtcgtctggaatggcatttgacccaactgctggagccgcaa
attcagtcctcgccgtttgccaaagatgaagcattgattgccagggagcaggcgttaatc
aaccagcaaccgctcgcggcgcgcgtctacggacgcctgaaacgtctgctcgcggcggat
gaaaacctcaagccggtttcgctggcctcgctgggtggcccgcaaagtgagctggtgttc
tcgcgcaagagcggtaagtcgctcaatgacggtatccccggtttatataccccggacggt
tactggcagcatttcgataagcagattggcacggtgaccaacgcgctgcataccgatgat
gcctgggtacttggttccaccgtcaaacaagaagatcagcagcagacggataacgcggta
cgccagctttacgcgcgggattttatcagccagtgggacagcttcctgagtgatattgcg
ctcaacaacagtgccaatctttcacagcgtattaatacagcacggctgctctcgggcaac
agttcgccgctgcgccagttggtggtcaacttaagccaggtattgacgctgacccgtgac
accccggaagagggcgaaaaaaagccggaggagggcaacagcaccagccgcacactcaac
gtgttgtttggcaatcgtgataacgcgaacgctgcgcctgccgccgcgacggcgcagacg
ccggaacagcgggtaacggaacactacgcgccgattatcgaactggctcagccgctggaa
aaaggcggcaaaaccatcgtgtttgatgattttttaaagcaggttgatgaactttatcgc
tatctgacagcggtacaggatgcggccaacagcggcatgcctgcccccggcggtgaagcc
atcagtcgcctgcaggccagtgcagggcgtctgcccggcgggttgcagtccatgttcagc
aatatggcggtgggcgccagcagcgatacgcaaagccgcgagctggaaaatgtccgcaag
cgtatcagtgtcgaagtgggcggtttttgccgccaggccatcgccggtcgttacccgctg
gttcgtaacgccagcagtgaagtgacgccagacgatctggcgcgcatgtttgcccctggc
accggcctgatggacagtttctttcgtgacaacctgaccagcaaagtggataccacccag
tcaccctggcgctttatgccgggcattgatggtaagaccttgccaggtagcgaaggatta
ctggcgccgtttcaacaggcgcaatctattcgtgatgcgttttttgccggaggaagcacg
acgccctcttatcgtgtgacggtgcgtaccgtgagcatggacaacgcgattttgaacctc
acgctggatgtggatgggcagattctccgttacagccacggtccacaggcggtgcaactg
gtgaactggccagggccgggcggaaccaaccaggtacggatgcagcttgggctgacgaac
ggcaccacctcgacgctggtgaccaatggagcatgggcgctgaaccgctttgttgacaag
gcgcgtgtgacaccgggcagcagcagtctgagccgccaggcaacctacaacgttgatgga
caccaggtcacgcttgagttcatccctggcagcattcgcaacccgtttcagcttccccgt
ttcgcatgcccttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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