KEGG   Phytobacter diazotrophicus: HHA33_22245
Entry
HHA33_22245       CDS       T06586                                 
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
pdz  Phytobacter diazotrophicus
Pathway
pdz00730  Thiamine metabolism
pdz01100  Metabolic pathways
pdz01240  Biosynthesis of cofactors
pdz04122  Sulfur relay system
Module
pdz_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:pdz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    HHA33_22245 (thiI)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    HHA33_22245 (thiI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pdz03016]
    HHA33_22245 (thiI)
Enzymes [BR:pdz01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     HHA33_22245 (thiI)
Transfer RNA biogenesis [BR:pdz03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    HHA33_22245 (thiI)
SSDB
Motif
Pfam: ThiI THUMP QueC Diphthami_syn_2 Rhodanese tRNA_Me_trans
Other DBs
NCBI-ProteinID: QJF19107
Position
complement(4672466..4673914)
AA seq 482 aa
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKQYDETLAVVRHWDNIEVRAKDENQR
LVIRDALTRIPGIHHILEVEDVPFTSLHDIFEKALVQYRDQIEGKTFCVRVKRRGKHEFS
SIEVERYVGGGLNQHVESARVKLTHPDVTVNLEIEDDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEANFDFEILDRVVAEASNIDIRDIAAQTSETVVEVETVSGFGPNDVILDIRSIDEQD
DKPLAVEGIDVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgtttg
cgctttattaaaattctcaccgggaacattcgtaacgttcttaagcagtatgatgagacc
ctcgccgttgtccgtcactgggataatatcgaagtgcgcgccaaagatgaaaaccaacgt
ctggtgattcgtgacgcgctgacccgtatcccgggtattcaccatattctggaggtggaa
gatgtcccgttcacctctttgcacgatattttcgaaaaagcgctggtgcaataccgcgac
cagatcgaaggcaaaacgttctgcgtgcgtgtaaaacgtcgtggcaagcacgagtttagt
tctattgaagtggaacgctacgtcggcggcggtttgaatcagcacgtagagtccgcccgc
gtgaagctgacgcacccggatgtcaccgtgaatctcgagatcgaagatgatcgcctgctg
ctggtaaaaggccgttacgaaggcatcggtggtttcccgattggtacgcaggaagatgtt
ctgtcgctgatttccggcggtttcgactccggcgtctccagctacatgctgatgcgtcgt
ggctgtcgcgtacattattgcttctttaacctgggcggcgcggcgcatgagattggcgtg
cgtcaggttgcgcattacctgtggaaccgctttggcagctcccaccgggtacgttttgtg
gcgatcaattttgaaccagtggttggcgagatcctcgaaaaagtcgatgacggccagatg
ggcgtagtgctcaaacgcatgatggtgcgtgcggcatccaaagttgccgagcgctatggt
gtgcaggcgctggtaacgggtgaagcgctcggtcaggtctccagccagacgctgaccaac
ctgcgcctgattgataatgtctccgataccctgatcctgcgtccgctgatctcttacgat
aaagagcacatcatcgatctggcgcgtgaaatcggtaccgaagattttgcccgtacgatg
ccggaatattgcggtgttatttcgaaaagcccgacggtgaaagccgtgaaggccaaaatc
gaagcggaagaagcaaatttcgatttcgagatcctggatcgtgtagttgcggaagcctcg
aatatcgatattcgtgatatcgccgcgcagaccagcgaaacggtcgttgaggtcgaaacg
gtcagcggatttggcccgaacgatgtgattctcgatatccgttctattgacgagcaggac
gataaaccgctggcggtggaaggtatcgacgtggtgtcgctgccgttctataagctgagc
accaaattcggcgacctcgatcagagcaaaacctggttactgtggtgtgagcgtggggtg
atgagccgcctgcaggcgctctatctgcgtgagcagggttttgagaatgtgaaggtgtac
cgaccttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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