KEGG   Phytobacter diazotrophicus: HHA33_23395
Entry
HHA33_23395       CDS       T06586                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pdz  Phytobacter diazotrophicus
Pathway
pdz03030  DNA replication
pdz03430  Mismatch repair
pdz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HHA33_23395 (dnaE)
   03430 Mismatch repair
    HHA33_23395 (dnaE)
   03440 Homologous recombination
    HHA33_23395 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdz03032]
    HHA33_23395 (dnaE)
   03400 DNA repair and recombination proteins [BR:pdz03400]
    HHA33_23395 (dnaE)
Enzymes [BR:pdz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HHA33_23395 (dnaE)
DNA replication proteins [BR:pdz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HHA33_23395 (dnaE)
DNA repair and recombination proteins [BR:pdz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HHA33_23395 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP DNA_pol_IIIA_C HHH_6 tRNA_anti-codon MutS_II
Other DBs
NCBI-ProteinID: QJF19305
Position
complement(4926182..4929664)
AA seq 1160 aa
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGTAHGA
GLKPIVGADFHVQSELLADELTQLTVLAANNVGYQNLTLLISRAYQRGYGAAGPWIDRDW
LVELKDGLILLSGARMGDVGKSLMRGNSALVEQCVAFYEEHFPNNYYLELIRTGRADEEN
YLHAAVRLAEERGLPVVATNDVRFIDAGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEDEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSKEGL
EERLAFLFPDEAVRKEKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQVEQSYASCQPWPEQVVLDGERETLGLY
LTGHPITQYLKEIDRYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatagacggg
ctggcgaaaaccgggccgctggtgaaaaaggcggccgcgctcggcatgccagcgctggcg
atcaccgattttaccaacctgtgtggcctggtgaagttctacggaacggcccatggcgcg
gggttaaaaccgattgtgggggccgattttcatgttcagagcgaactactcgcggacgaa
ctgacgcagctcactgtactggcagcaaacaacgtcggctatcaaaacctgacgctgcta
atttctcgtgcctatcagcgtgggtacggggcggcggggccatggattgaccgcgactgg
ctggttgagctgaaagacgggctgatcctgttgtctggtgcccggatgggggatgttggt
aaaagcctgatgcgcggtaatagcgcgctggtcgagcagtgcgtggcgttttacgaagag
catttccccaacaactattatctcgaactgattcgtaccggtcgcgcggacgaagagaac
tatttgcatgcggcggtacggctcgccgaagaacgcggtctgcctgttgtggcgaccaat
gacgtgcgttttatcgatgcgggcgactttgatgcccatgaaatccgtgtcgcgattcac
gacggctttacccttgatgaccccaagcgtccgcgtaattactctgcgcagcaatatatg
cgcagcgaagacgagatgtgtgagcttttctctgacatcccggaagcgctcgaaaacacg
gtagaaatcgccaaacgttgtaacgtcacggtgcgtctgggcgaatacttcctgccccag
ttcccgaccggggatatgaccaccgaagattttcttgtcgcgaagtcgaaagaggggctg
gaagagcgcctggcattccttttcccggatgaggcggtccgtaaagagaaacgccctgag
tatgatgaacgtctggatattgaactccaggttattaaccaaatggggttcccgggctac
ttccttatcgttatggaatttatccagtggtcgaaagataacggtgtgccggtaggcccg
gggcgaggctccggtgcgggttcgctggtagcctatgcgctgaaaattaccgacctcgac
ccgctggaattcgacctgctgttcgaacgtttccttaaccctgaacgtgtttctatgccc
gactttgacgtcgacttctgtatggaaaaacgcgatcaggttatcgagcatgtagcagat
atgtacgggcgtgacgcggtatcgcagattattaccttcggtacgatggcggcgaaagcg
gttatccgcgacgtgggccgcgtgctggggcatccgtacggttttgtggatcgtatttct
aagctggttccacccgatcctggtatgacgttggcgaaagcctttgaagcggaaccgcaa
ctgccagaaatctacgaggctgacgaggaagtcagagcgctaattgatatggcgcgtaag
ctggaaggcgtcacgcgtaacgccggtaaacacgccggtggtgtggttatcgcgccgacc
aaaatcaccgattttgcaccgctctattgtgatgaagcggggcaacatccggtcacccag
tttgataagaacgacgtggaatacgcgggtctcgtgaagtttgacttcctggggctgcgt
acgctcaccatcatcaactgggcgctggagatgatcaacgcccgccgagagaagaacggc
gagccaccgcttgatatcgccgctatcccgcttgatgacaagaaaagcttcgacatgctg
cagcgctcggaaaccacagcggtattccagcttgaatcccgcggcatgaaagacttgatc
aagcgtctgcagcctgactgcttcgaagatatgatagccctggtggccctgttccgtccg
ggcccactgcaatcgggaatggtggataactttatcgaccgtaagcacgggcgcgaagag
atttcctacccggacgtacagtggcagcatgagagtctgaaaccggtactggagccgacc
tacggcatcatcttgtatcaggaacaggtgatgcagatagcccaggtgctttctggctat
accctcggcggcgcggacatgctgcgtcgtgcgatgggtaagaaaaagccggaggagatg
gccaagcagcgcgggaccttcgaagaaggggcgaagaaaaacggcgttgacggcgagctg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatcgcac
tctgctgcctatgctttagtctcatatcagacgctgtggctgaaagcgcactatccggca
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaggtggtaggcctg
gtggacgaatgctggcgcatggggctcaagatcctgccgccggatatcaactctggtctg
taccatttccacgtgaatgacgacggtgaaattgtttacggcattggggctatcaaaggc
gtgggtgaaggcccgattgaagcgatcctcgaggctcgtaataacggcggctatttccgg
gagctgtttgatctctgtgcccgtaccgacaccaaaaaactcaatcgccgggtgctggaa
aaactgataatgtccggggcgtttgaccgccttgggccgcatcgggccgcgctgatgaat
tccctcggcgacgccctgaaagccgccgaccagcatgcgaaagcggaagccattggtcag
gcggatatgttcggtgtcctggcagaagagcccgaacaggtggaacagtcttacgccagt
tgccagccgtggccagagcaggtggtgctggacggtgaacgtgaaaccctggggctgtac
ctgaccgggcatccgatcacccagtatttaaaagagatcgatcgttacgtcggtggctac
cgactaaaagacatgcacccgaccgaacgtggcaaggtcaccacggcggcggggctggtg
attgctgcgcgggttatggtcaccaagcgcggcaatcgtattggcatctgtactttggat
gaccgttccgggcgcctggaagtgatgttgttcacggacgccctggacaaatatcagcaa
ctgctggaaaaagaccgcatactgatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagctcgtgaaaaatat
gcgcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttgaaccga
ctccgtcagtctctggaaccccatcgctcggggaccattccagtacatctctactatcag
agggcggatgcacgtgcacgattacgtttcggcgcaacgtggcgtgtctctccgagcgat
cgtttattaaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system