KEGG T04989: PESP

Pseudoalteromonas espejiana: PESP_a0319

Entry

PESP_a0319        CDS       T04989

Symbol

rep

Name

(GenBank) ATP-dependent DNA helicase Rep

K03656

ATP-dependent DNA helicase Rep [EC:5.6.2.4]

Organism

pea Pseudoalteromonas espejiana

Brite

KEGG Orthology (KO) [BR:pea00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pea03400]
    PESP_a0319 (rep)
Enzymes [BR:pea01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PESP_a0319 (rep)
DNA repair and recombination proteins [BR:pea03400]
Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PESP_a0319 (rep)

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_11 ResIII PhoH PIN_12 AAA_22

Other DBs

NCBI-ProteinID:

ASM48582

Position

I:314309..316327

AA seq 672 aa
MKLNPKQDEAVKYISGPCLVLAGAGSGKTRVITNKIAYLVQKCEYKARNIAAVTFTNKAA
KEMRERVLQTLNKQEAKGLWVSTFHTLGLEIIKKELKTLGFKEGFSLFDDQDTNQLLGDL
TEDELKKDKDLLNLLKMQIGSWKNELILPEQAIREARDAQKSLFAQLYARYQNQLRAYNA
LDFDDLIMIPTLLLSNNATSRERWQQRFKYLLVDEYQDTNTSQYQLVKLLVGERARFTVV
GDDDQSIYSWRGARPQNLVLLSKDYPGLRLIKLEQNYRSAQRILKAANILIANNPHDIEK
KLFSELGYGEPIKVIGCRDEEHECERVVAEIISHKFMKRTSYKDYAILYRGNHQARGFEK
SLMSNRIPYKISGGMSFFSRSEIKDIMAYLRLLVNQDDDNAFLRIVNTPRREIGTVTLEK
LGTLANEKHQSLFATCFDNDLGYRLKGRGLNALSGFARWVVELSDNAVRSDTLEAVKDLV
RSINYEAYLYESSPSAKAAEMRMKNVSELYRWITDMLTGDADNEPMTLPEVVSKLTLRDM
LERNEEEDEADAVQLLTLHASKGLEYPYVFMVGMEEGLLPHQVSIDEENVDEERRLAYVG
ITRAQQELTLTYAKIRRQFGETSQTELSRFVQELPQDDLAFENKKAPNTQAERMEKGQAR
VANLRAMLKKPS

NT seq 2019 nt +upstreamnt +downstreamnt
atgaaactcaatcctaaacaagatgaagcagtaaaatacattagtggtccatgcctagtg
cttgcaggtgcaggctcaggcaaaacgcgtgtaatcacaaataaaattgcttacttagta
caaaaatgtgagtacaaagcgcgaaatattgcagcggtaacatttaccaataaagcggca
aaagagatgcgcgaacgtgtgcttcaaacgcttaataagcaagaggcaaaaggattatgg
gtatcgacgtttcataccttaggccttgaaataataaaaaaagagcttaaaacacttggc
tttaaagaaggcttttcactgtttgacgaccaagatacaaaccagcttttaggtgatttg
actgaagacgagcttaaaaaagataaagacttacttaacctattaaaaatgcaaataggt
agctggaaaaacgaactcattttaccagaacaagcaattcgcgaagcacgcgatgcacaa
aagtctttatttgcgcagctttatgcgcgctatcaaaatcaattaagagcgtataacgcc
ctcgattttgatgatcttattatgatccccacgctattacttagtaataatgcaacctcg
cgagagcggtggcagcagcgttttaaatacctgctggtggatgagtaccaagataccaat
accagccaatatcagctagttaagctgttagtaggggagcgtgcacgttttactgtggta
ggcgatgatgaccaatctatttattcatggcgtggtgcgcgcccgcaaaacttagtgcta
ttaagtaaagattacccaggtctgaggctaataaagcttgagcaaaactaccgtagtgca
caacgaattcttaaagctgcaaacattttgattgctaataacccgcacgatatagaaaaa
aagctatttagtgagcttggttatggcgagccaattaaagtgattggctgtagagatgaa
gagcatgagtgtgagcgtgtagttgccgaaattatttcgcataaatttatgaagcgtacc
agctataaagattacgctattttatatcggggtaaccatcaggcgcgtggttttgaaaag
tcgttaatgagtaaccgtatcccgtataaaattagtgggggtatgtcgtttttctctcgc
tcagaaattaaagatattatggcgtacttacgcttattagttaatcaagacgacgataac
gcttttttacgtattgttaatacaccacgccgtgaaatagggactgttacgcttgaaaaa
ctaggcactttagcaaatgaaaaacaccaaagtttatttgccacctgttttgataacgac
ttaggttataggctcaaaggccgtggtttaaacgcgctatcgggctttgcccgctgggtt
gtagagctctctgataatgcagtgcgcagtgacaccctagaagcggtaaaagatttagta
cgcagcattaattatgaagcctatttatacgagtcatcgccaagtgctaaagccgctgaa
atgcgaatgaaaaacgtctcggagctgtatcgttggatcaccgatatgctcacgggtgat
gctgacaatgagccgatgaccttacctgaggttgttagcaaattaacacttcgagatatg
cttgagcgtaacgaggaagaagatgaagccgatgcagtacagttgcttactttgcatgcg
tctaaaggcttagagtacccgtatgtgtttatggtcggtatggaggagggcttattgcct
caccaggtaagcattgatgaagaaaatgtagatgaagagcgtcgtttagcttacgtaggt
attacccgagcgcagcaagagcttacgttaacttacgctaaaatacgccgccaatttggt
gaaacatcacaaactgagctaagccgctttgtgcaagaactgcctcaagacgatcttgca
tttgagaataaaaaagcgcccaacacgcaagctgagcgtatggaaaaaggccaagctcgt
gttgcaaacttaagagcaatgcttaaaaaaccaagttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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