KEGG T04989: PESP

Pseudoalteromonas espejiana: PESP_a1108

Entry

PESP_a1108        CDS       T04989

Symbol

phrB

Name

(GenBank) deoxyribodipyrimidine photo-lyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

pea Pseudoalteromonas espejiana

Brite

KEGG Orthology (KO) [BR:pea00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pea03400]
    PESP_a1108 (phrB)
Enzymes [BR:pea01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     PESP_a1108 (phrB)
DNA repair and recombination proteins [BR:pea03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    PESP_a1108 (phrB)
Prokaryotic type
    PESP_a1108 (phrB)

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase

Other DBs

NCBI-ProteinID:

ASM49265

Position

I:complement(1071426..1072940)

AA seq 504 aa
MREKINIVWFKRDLRLSDHLPLKHAFNSDIPTLLIYNFEPLMLEDAHYNERHWRFVYQSI
TQINSQLERFNATLYIFSQDMLTLLNALNKTYQIINLYSHQEIGLNNTFERDKAVTTWCK
EQQVHWQESKTGAVIRGKKNRSNWNERWQKTMQAPVAIPNWKNIKTITLNNYQTPKLPNS
YTQSDDNFQIGGPLHAHSVLHSFFVERGKGYQKGISSPSLSRTHCSRLSPYLAWGNISLK
QVYQMAIDEYHSKHPDKKGWKRPLAAFVSRLHWHCHFMQKFESECTMEFKALNPGYHEFP
YRDDANVKSDIERWAQGQTGIPIIDACMRCLKATGYINFRMRAMLVSFVTHHLNISWQQA
SFPLANYFLDFEPGIHYPQIQMQASVTGINTIRHYNPIKQSEDQDPTGAFIKKWCPELEK
LPIEYLHEPWQQTPMEALFNDFKLGEDYPEPMLNLTDASKQARERLWQYRERADVKRAIP
NILKRHVGLTRTIQQKAKSAKHGA

NT seq 1515 nt +upstreamnt +downstreamnt
atgcgtgaaaaaataaacatagtgtggtttaaacgcgatttacgcttatcagatcacctt
ccactaaaacatgcctttaatagcgatataccaacgctgcttatttataactttgagccg
ctcatgcttgaggatgcgcattataacgagcggcattggcgctttgtttatcaatcaatc
acacaaataaacagccaattagagcgctttaacgccacactttatatttttagccaagac
atgcttactcttttaaatgcgctcaataaaacatatcaaataataaacttatacagccat
caagaaattggcttaaataatacctttgagcgagataaagccgttaccacgtggtgtaaa
gagcaacaggtacactggcaagaatcaaaaacgggcgctgttattcgtggcaaaaaaaat
cgaagtaattggaacgaacgctggcaaaaaacaatgcaggctcctgttgctattcctaat
tggaaaaatataaaaaccattacacttaataactaccaaacacccaaattgcccaacagc
tacacgcaaagcgatgacaactttcaaataggtgggccattacacgcccatagtgtatta
cacagtttttttgtagagcgcggcaaggggtatcaaaaaggaatatctagcccaagttta
agccgtactcattgctctaggctctcaccctatttagcatggggtaatattagccttaaa
caggtgtaccaaatggctattgatgaataccattcaaaacaccctgataaaaaaggctgg
aaacgcccgctcgctgcttttgtatcgcgattgcattggcattgccactttatgcaaaag
tttgaaagtgaatgcactatggagtttaaagcattaaatccaggctaccatgagtttccc
tacagagatgacgctaatgtaaaaagcgatattgagcgctgggcacaaggccaaacgggt
attcctattattgatgcctgtatgcgctgcttaaaagcaacgggttatattaattttaga
atgcgcgctatgttagtcagctttgtaacacatcatttaaatataagttggcagcaggca
agttttccactggcaaattactttttagattttgaacctggaattcactacccgcaaata
caaatgcaggcatcggtaacgggtattaataccattaggcattacaacccgattaagcag
tctgaagatcaagacccaaccggcgcctttataaaaaagtggtgccccgaacttgaaaaa
ctgccaatagaatatttacacgagccttggcaacaaacaccaatggaagcattatttaac
gactttaaattaggagaagattacccagaacccatgctcaatttaaccgatgcttcaaag
caagctcgcgaacgcttgtggcaataccgcgagcgagcagacgttaagcgtgctattcct
aatatattaaaaagacacgtagggcttactcgcacaatacaacaaaaagcaaagagtgct
aaacatggcgcataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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