KEGG   Pseudoalteromonas espejiana: PESP_a1591
Entry
PESP_a1591        CDS       T04989                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
pea  Pseudoalteromonas espejiana
Pathway
pea03030  DNA replication
pea03430  Mismatch repair
pea03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PESP_a1591 (holB)
   03430 Mismatch repair
    PESP_a1591 (holB)
   03440 Homologous recombination
    PESP_a1591 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pea03032]
    PESP_a1591 (holB)
   03400 DNA repair and recombination proteins [BR:pea03400]
    PESP_a1591 (holB)
Enzymes [BR:pea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PESP_a1591 (holB)
DNA replication proteins [BR:pea03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PESP_a1591 (holB)
DNA repair and recombination proteins [BR:pea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PESP_a1591 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DUF1040 RsgA_GTPase
Other DBs
NCBI-ProteinID: ASM49687
Position
I:1532900..1533814
AA seq 304 aa
MALPWLNTVEQQLAQSYTSQRFHHAQLFCGPIGVGKFSLSEQLANSLLCQNINTHMARPN
TVLAPCGQCKSCSLTLAGNHPDKRVTQVEGQSIGVDDIRAISDFMNHSAAQNGNKVAIIE
NCEKMTTAAANALLKTLEEPSNSRFLILTTSQPAQLPATILSRCAKTDIKVASTQSAQQW
LESLNISGFEWLPLFYAQPLLIQQWQAQEQLQHIDTLYKFATEFKHSHNFTALVDIINKQ
PELIRIFTLFLSEQLKQQLILGMSFDAYQNAQQALNEFLQNNTQVLGLNLPLAVSRLAHA
LRNI
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcattgccatggctaaacacggtagagcagcagcttgcgcaaagttatacatcgcag
cggtttcatcatgcgcagttattttgtggcccaataggtgtaggtaagttttcacttagt
gaacagctagcaaatagtttattgtgccaaaatattaatacgcacatggcaaggcctaat
acagttttagcaccgtgtgggcaatgtaaaagttgttcattaacacttgcaggtaatcac
ccagataaacgtgtaacgcaagttgaagggcaaagtattggtgttgatgatattcgcgct
attagcgattttatgaaccactctgccgcgcaaaacggtaataaagtagcaataatcgaa
aactgcgaaaaaatgaccaccgcggcggccaacgcacttttaaaaaccttagaagagccc
agtaatagccggtttttaattttaacaactagccaacctgcgcagcttccagcgactatt
ctaagccgttgtgctaaaacagatataaaagtagcaagcactcaaagtgcacagcaatgg
cttgagtcgcttaacataagcgggtttgaatggttgccattattttacgctcagccatta
ttaatacaacaatggcaagcgcaagagcagctacaacatattgatacactttataaattt
gcaactgagtttaaacacagccataattttactgcgctggtagatataataaataaacaa
ccagagctaatacgcatttttacattatttttaagcgagcagttaaaacagcagcttata
ctgggtatgagctttgatgcataccaaaatgcacagcaagcgctcaatgaatttttacaa
aataatactcaggtacttgggcttaatttacctttagctgtgtcgcgattagcgcacgcc
ctgcgtaacatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system