KEGG   Pseudonocardia sp. EC080619-01: AD017_05430
Entry
AD017_05430       CDS       T04234                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pecq  Pseudonocardia sp. EC080619-01
Brite
KEGG Orthology (KO) [BR:pecq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pecq03016]
    AD017_05430 (truB)
Enzymes [BR:pecq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AD017_05430 (truB)
Transfer RNA biogenesis [BR:pecq03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AD017_05430 (truB)
 Prokaryotic type
    AD017_05430 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 DKCLD NAD_binding_3
Other DBs
NCBI-ProteinID: ALL80791
UniProt: A0A0P0S9K2
Position
complement(1180785..1181678)
AA seq 297 aa
MPKPPPPPPGLVVVDKDRGPTSHDVVGKLRRIMGTRKVGHAGTLDPMATGVLVVGIERAT
KLLGHLSLDTKAYTATVRLGQATDTDDAEGTPVGDPVTVTAGEPEVRGAMAALTGDIEQV
PSAVSAVKIDGKRAYQRVRDGETVEIPARPVTVSAFDLRDLRRDGGFVDLDVVVECTSGT
YVRALARDLGVALGAGGHLTALRRTRVGPFTLEHARTVEQLAAEPGLSLDLAAAVATAFP
RVDVDDAAATDVRIGRSLPSAGIPGTYGVFGPDGAALALMADRGPSARPVVVLAPAG
NT seq 894 nt   +upstreamnt  +downstreamnt
gtgccgaagccaccgcctccgccgcccggtctcgtcgtcgtcgacaaggaccggggtccg
accagccacgacgtcgtcgggaagctgcgccggatcatgggcacccgcaaggtcggccac
gccgggacgctcgacccgatggcgaccggcgtgctggtcgtcggcatcgagcgggcgacg
aagctgctggggcacctgtcgctggacaccaaggcctacaccgcgaccgtccggctcggg
caggcgaccgacaccgacgacgccgagggcacgcccgtcggtgaccccgtcacggtcacg
gcgggcgagccggaggtccggggcgcgatggcggcgctgaccggggacatcgagcaggtc
ccgagcgcggtgtccgcggtgaagatcgacgggaagcgcgcctaccagcgcgtccgcgac
ggcgagacggtcgagatcccggcccggccggtcacggtgtcggcgttcgacctgcgcgac
ctgcgccgggacggcgggttcgtggacctcgacgtcgtcgtggagtgcacgtcggggacc
tacgtgcgggcgctggcccgcgatctcggggtggcgctcggcgcgggcgggcacctcacg
gcgctgcgccgcacccgggtcgggcccttcaccctggagcacgcccgcaccgtcgagcag
ctggccgccgagccgggcctctcgctcgacctggccgcggcggtggcgacggcgttcccg
cgggtcgacgtcgacgacgcggccgccaccgacgtgcggatcggccggtcgctgccgtcc
gcggggatccccggcacgtacggcgtgttcgggcccgacggggccgcgctcgcgctgatg
gccgaccgcggaccgtccgcgcgcccggtggtcgtgctggccccggccggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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