KEGG   Candidatus Pelagibacter giovannonii: E5R92_06240
Entry
E5R92_06240       CDS       T06537                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
peg  Candidatus Pelagibacter giovannonii
Pathway
peg00470  D-Amino acid metabolism
peg00550  Peptidoglycan biosynthesis
peg01100  Metabolic pathways
peg01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:peg00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    E5R92_06240
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    E5R92_06240
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    E5R92_06240
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:peg01011]
    E5R92_06240
Enzymes [BR:peg01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     E5R92_06240
Peptidoglycan biosynthesis and degradation proteins [BR:peg01011]
 Precursor biosynthesis
  Amino acid ligase
   E5R92_06240
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N RimK ATP-grasp_4 GARS_A ATPgrasp_Ter
Other DBs
NCBI-ProteinID: QIZ21378
UniProt: A0A6H1Q3H0
Position
1161164..1162078
AA seq 304 aa
MKKKILILSGGISKERLISLDTGKQVAKELTKNGYKVLISEPDKNLSKNITSFKPDVIFN
ALHGQFGEDGYIQAILETKKIPYTHSGVIASSIAMDKEISKKIFIKKKILTPKYIKFNHK
KNKFNIIKLIEKNLKFPVVAKPINEGSSVHVYICDKTNIIKNLKALRGYNEILIEEFIPG
REIQVAIMDNKILGAIELEPKRKFYDYEAKYNLNAMTKHLIPVDLSKNNLAKISGIAREA
HKIIGCKGVTRSDFKFFNGKFYLLEINTQPGMTKLSLVPEIAKYKGISFIKLIEWILKDA
SINR
NT seq 915 nt   +upstreamnt  +downstreamnt
atgaaaaaaaaaatcttaatattatctggtggcatatctaaggaacggttaattagctta
gatactggaaagcaagttgccaaagagttaaccaaaaatggatataaagttttaattagt
gagcctgataaaaatctatcaaagaatattacttcatttaaaccagatgttatttttaat
gcactacacggacaatttggtgaggatggatacattcaagcaattttagagactaaaaaa
attccatatacacactcaggtgtaattgcatcatcaatagcaatggataaagaaatttca
aaaaaaatttttataaaaaaaaaaatcctaactccaaaatatattaaatttaatcataaa
aaaaataaatttaatattataaaattaattgaaaaaaatttaaaattccctgtagtagca
aaacctataaatgaagggtcaagcgttcatgtgtatatttgtgataagaccaatataata
aaaaatctaaaagctttaagaggctataatgaaatattaattgaggaatttataccaggc
agagaaatccaagttgcaataatggataataaaatactcggtgcaattgaacttgagcct
aaaagaaagttttatgattatgaggcaaaatataatttaaacgctatgaccaagcaccta
attcctgtagatttgagcaaaaataatctagctaaaattagtggcatagcaagagaagct
cacaaaattataggctgtaaaggtgttactagatcagactttaaattttttaatgggaaa
ttttatttgctagagataaatactcagccgggaatgactaaactttctttggtccctgag
atagcaaaatataagggtataagctttataaaattaattgaatggattctaaaagatgca
tcaatcaataggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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