KEGG   Pedobacter sp. KBS0701: FFJ24_013230
Entry
FFJ24_013230      CDS       T06361                                 
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
  KO
K08316  16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Organism
pek  Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:pek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pek03009]
    FFJ24_013230 (rsmD)
Enzymes [BR:pek01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     FFJ24_013230 (rsmD)
Ribosome biogenesis [BR:pek03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    FFJ24_013230 (rsmD)
SSDB
Motif
Pfam: Cons_hypoth95 Methyltransf_31 MTS Methyltransf_25 Methyltransf_15 FtsJ Methyltransf_11 PrmA Methyltransf_23 Ubie_methyltran Methyltrans_SAM Methyltransf_12 MethyltransfD12 Spermine_synth UPF0020 BpsA_C DNA_methylase RrnaAD TehB KMPT-N Methyltransf_32 tRNA_U5-meth_tr Methyltransf_24 Methyltransf_4 RsmJ TRM
Other DBs
NCBI-ProteinID: QDW25728
Position
3276580..3277113
AA seq 177 aa
MRIIGGKLKGIRLQPPANLPVRPTTDMAKEALFNILNNKYDFEACSVLDLFCGTGNLTFE
FASRGAESILAVDMDYGCVNWVKNTAKQHQFDQVDVRKGDVFKLLKQMTGAYDLIFADPP
YNMPNIPQIPVMVKEQQLLKPDGLLIVEHQSNMKLNSQPGYTETRKYGNSSFSFFEL
NT seq 534 nt   +upstreamnt  +downstreamnt
atgcgaataatcggtggcaaattaaagggtatccgtttgcagccccctgcaaatttaccg
gtacgtcctactacggatatggccaaagaagcgctgtttaacatcctaaacaataaatac
gatttcgaagcctgttccgtactcgatttattctgtggtaccggaaacctgaccttcgaa
tttgcctcacgtggagcagaaagtattttagccgttgatatggattatggttgcgtaaac
tgggttaaaaacacagcaaaacaacaccagtttgatcaagttgatgtgcgtaaaggcgat
gtgttcaagttattaaaacaaatgactggtgcttacgatctgatctttgccgatccgccc
tacaatatgcctaacattccacagattccggtgatggtaaaagagcaacaattgcttaaa
cccgatggcttgttgattgtagaacaccaaagtaacatgaaactgaacagccagcccggc
tacaccgaaactagaaaatacggcaattcatcgttcagcttttttgagttatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (26)   
   Pfam (26)   
All databases (38)   

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