KEGG   Candidatus Pelagibacter sp. IMCC9063: SAR11G3_01158
Entry
SAR11G3_01158     CDS       T01465                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pel  Candidatus Pelagibacter sp. IMCC9063
Pathway
pel00260  Glycine, serine and threonine metabolism
pel00630  Glyoxylate and dicarboxylate metabolism
pel00670  One carbon pool by folate
pel00680  Methane metabolism
pel01100  Metabolic pathways
pel01110  Biosynthesis of secondary metabolites
pel01120  Microbial metabolism in diverse environments
pel01200  Carbon metabolism
pel01230  Biosynthesis of amino acids
pel01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:pel00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    SAR11G3_01158
  09102 Energy metabolism
   00680 Methane metabolism
    SAR11G3_01158
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SAR11G3_01158
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    SAR11G3_01158
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    SAR11G3_01158
Enzymes [BR:pel01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     SAR11G3_01158
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_5 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AEA81633
UniProt: F2I1B9
Position
complement(1027618..1028904)
AA seq 428 aa
MSKNNSRINKFFKSSVKESDPDLHSSIVKELDRQRSHLELIASENIVSKAILDVQGSVLT
NKYAEGYPGKRYYGGCEFVDIAEDLAIERVTKLFNVKFANVQPHSGAQANGAVFLALLNP
GDTILGMGIDQGGHLTHGAPPAQSGKWFNAISYGVTKETGLIDYNSVLSLAKKHKPKLII
AGGSAYSRIINFKKFREAADEVGAKLLVDMAHFSGLVAGQVYPNPCDFADVVTSTTHKVL
RGPRGGIILTNSEELAKKFNSAVFPGLQGGPLMHVIAAKAVCFKEALSDDFKLYAKDVVE
NARILSKTLSDLGLTIFSGGTDTHLVLVDLRPFGLTGKEAEISLGRAHLTCNKNGIPFDE
QKPWITSGIRLGTPACTTRGLGLAEFKLIGEYINEVLQGLKNNKDDNSVVEKDVAQKVKD
LCNNFPIY
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgtcaaaaaataattctaggataaataaattttttaaatcaagtgtaaaagaatctgac
ccagatttgcattcctctattgttaaagagcttgataggcaaagatctcacttggagtta
attgcatcagaaaatattgtatctaaagctatactagatgttcaagggtcagtattaacc
aataaatacgcagaaggttatccaggaaagagatattatggcggttgtgaattcgttgat
attgctgaggacttagctattgaaagagtaacaaaattatttaatgtaaaatttgcaaat
gttcagccacattctggagctcaagcgaatggtgctgtttttttagccttacttaatcca
ggcgatactattttagggatgggtattgatcaaggtggccacttaactcatggagctcct
ccagcacaatctggaaaatggtttaacgcaatttcttatggagttaccaaagaaacaggc
ttgattgattataattctgttttgtctttagctaaaaaacataaaccaaaattaattatt
gcaggtggtagcgcgtattcaagaataattaattttaaaaaatttagagaagccgctgat
gaagttggtgctaagttattggtagacatggctcacttttctgggctcgttgctggccaa
gtatatcccaacccatgtgattttgcagatgtcgtaacttctaccacgcacaaagtatta
cgaggaccaaggggcggtatcattttgactaacagtgaagagcttgcaaaaaaatttaat
tcagcggtatttccaggtttacaaggtgggcctttaatgcacgttatcgcagctaaggct
gtttgttttaaagaagctttatctgacgattttaaattatacgctaaagatgttgttgag
aacgccaggatattatcaaaaacacttagtgacttgggcctaactattttttctggcggt
acagacacacatttagttttggttgatttgagaccatttggtcttacaggaaaagaggct
gaaatatcattaggtagggctcacttaacttgtaataaaaatggaataccttttgatgaa
caaaaaccttggatcacctccggtattagattgggaacacccgcttgtacaactagaggg
cttggtttagctgaatttaagttaatcggagaatacattaatgaagttttgcaaggactt
aaaaataacaaagatgacaacagcgttgttgaaaaagatgttgcacaaaaagtaaaagat
ctttgtaataactttccaatttattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (10)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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