KEGG   Candidatus Pelagibacter sp. IMCC9063: SAR11G3_01408
Entry
SAR11G3_01408     CDS       T01465                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pel  Candidatus Pelagibacter sp. IMCC9063
Pathway
pel00470  D-Amino acid metabolism
pel00550  Peptidoglycan biosynthesis
pel01100  Metabolic pathways
pel01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pel00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SAR11G3_01408
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SAR11G3_01408
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    SAR11G3_01408
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pel01011]
    SAR11G3_01408
Enzymes [BR:pel01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     SAR11G3_01408
Peptidoglycan biosynthesis and degradation proteins [BR:pel01011]
 Precursor biosynthesis
  Amino acid ligase
   SAR11G3_01408
SSDB
Motif
Pfam: Dala_Dala_lig_C ATP-grasp_4 ATP-grasp_3 CPSase_L_D2 GARS_A
Other DBs
NCBI-ProteinID: AEA81883
UniProt: F2I343
Position
complement(1250029..1251141)
AA seq 370 aa
MKDIRTDSIKTIEKKIIPFKVKHPAILKSDKKIEVLIVPKGLNPNKNQKNVAIVWDEHSI
FNILSSAYNCVVITEIKSENDLKQLAIRKPDLVFSGVKYFTFNERIIWLNDYLETHGISY
IASGREALEYEHDKSRAKEIMQKADIKTADFFTTEPGEYPDQESLPVKFPLFVKPVTGGD
SRGIDFKSVVHDFKSFEAKVLDIKMKQKSTSLVETFLSGKEYSVGILQDSFSGTLNAMPV
EIMVDKNINGHCILDFDIKKNDEEVVIAVTDKEIFNQLCNLAKKSFIALGGKSLGRIDIK
MNHLNEPHFIEANLMPGLSKGYFFRSCFLNLNMSYEEMILLIAKNGIASSKAPIVSKDSI
LEVVESVSLN
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaaagatataagaaccgatagtatcaaaacgatcgaaaaaaagatcattccctttaaa
gtaaagcatccagctatattaaaaagtgataaaaaaatagaggtgcttattgttccgaag
ggcctgaatccaaataaaaatcaaaaaaatgttgcgattgtttgggatgagcattccatc
tttaatatattatcatcagcatacaactgtgtagttattaccgaaataaaatctgaaaat
gatttaaaacaattagctataagaaagccagatttggttttctcaggtgttaagtacttt
acattcaatgagagaattatttggttaaatgattatcttgaaacgcatggaatatcctac
attgcatcgggaagagaggcattggagtacgagcatgacaaaagcagagcaaaagagatc
atgcaaaaagctgacattaaaactgctgactttttcaccacagaacctggagaataccca
gatcaagaatctttaccagttaaattccctttgtttgttaagcctgtaaccggtggagat
agcaggggaatagattttaaatctgttgtgcatgattttaaaagttttgaagcaaaggtg
ctagatattaaaatgaaacaaaaatctacttctttagtggaaacttttctttctggaaaa
gagtatagtgttggaattttgcaagatagttttagtggaactttaaacgcaatgcctgtt
gagattatggttgataaaaatattaatggtcattgtattctagactttgatattaaaaaa
aatgatgaagaggtagtcattgccgtaacagacaaggagatattcaatcaattatgcaat
ttagctaaaaagtcttttattgcattgggtggaaaatctttaggacgtattgatattaaa
atgaatcatttaaacgaacctcatttcatcgaagcaaatcttatgccgggcttaagtaag
gggtattttttcagatcatgttttttaaatcttaatatgagttacgaggaaatgatttta
ttaattgcaaaaaatggaatagcctcaagtaaggctcccattgtctccaaagattctatt
ttggaagttgtggaatcagtctccttaaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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