KEGG   Pseudomonas entomophila: PSEEN4244
Entry
PSEEN4244         CDS       T00362                                 
Symbol
recJ
Name
(GenBank) ss DNA specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pen  Pseudomonas entomophila
Pathway
pen03410  Base excision repair
pen03430  Mismatch repair
pen03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PSEEN4244 (recJ)
   03430 Mismatch repair
    PSEEN4244 (recJ)
   03440 Homologous recombination
    PSEEN4244 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pen03400]
    PSEEN4244 (recJ)
DNA repair and recombination proteins [BR:pen03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     PSEEN4244 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     PSEEN4244 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      PSEEN4244 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: CAK16932
UniProt: Q1I603
Position
complement(4531885..4533594)
AA seq 569 aa
MRIEPRPLPSTLPFLGNLPPLLTRLYAARGVQSETELDKGLARLLPFQQLKGIDAAVDLL
VEALDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVQV
ALERQPQLLITVDNGISSVDGVAAAKAAGLRVLVTDHHLPGEQLPDADAIVNPNQPGCEF
PSKSLAGVGVIFYVLMALRARLRSLGRYETQAQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCEDAALALDMAQELDGLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVAGFHIRDALDAVAARYPSLISKFGG
HAMAAGLSLPADNFPAFAEAFDAEVRRQLREEDLTGRLLSDGSLAVEEFHLELARALRNA
GPWGQHFPEPLFHGVFQLVSQRVVGERHLKVVLKSECGAVTLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEAR
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgcgtatcgaacctcgtcccctgccgtcgaccctgccgtttctgggtaacctgccgcct
ttgctgacccgcctgtatgccgcccgtggcgttcagtcggaaaccgagttggacaagggc
ctggcgcgtttgttgccgttccagcagctcaaaggtatcgatgcggcggtggacctgctg
gtcgaggccctcgaccagcgccagcggattctcattgtcggcgatttcgacgccgacggt
gccaccgccagcacggtgggggtgctgggcctgcgtctgctgggcgcggcccacgtcgat
tacctggtacccaaccgattcgagtatggttacggcctgacgcccgagatcgtccaggtt
gcgctggagcgtcagccgcagctattgatcaccgtggataacggcatttccagtgtcgac
ggtgtggcggccgccaaggctgcggggttgagggtgctggtcaccgaccaccacttgcct
ggcgagcagttgccggatgccgatgccatcgtcaacccgaaccagcctggttgcgagttc
ccgagcaagtcgctggcgggcgtcggggtgatcttctatgtgctgatggccctgcgcgcg
cgcctgcgcagcctcgggcgctacgaaacgcaggcgcagccgaacatcggcgaactgctc
gatctggttgcgttgggcagtgtcgccgacgtggtgccgctggatgccaacaaccgcatc
ctggtgcaccaggggctcgagcgtatccgcgccggccgtgcgcggcctgggctcaaggcc
attctcgaggtggcccggcgtgaccatcggcgtatcacctccaccgacctgggcttcatt
ctcggccctcggctcaatgcagccggccgactggatgacatgagcctcggcattgaatgc
ctgctgtgcgaggacgctgcgctggcgctagacatggcccaggagctggatggcctgaac
caggaccgcaagtccatcgagcagggcatgcagcgcgaggcgctggcccagctcaaggat
ctgccggtggagtccatgccctatgggctttgcctgttcgacgctgactggcaccagggg
gtgatcgggattctggcgtcacgcctgaaggagcgttaccaccgcccgaccatcgccttt
gccgatgcgggggaggggatgctcaagggctcggcgcggtcggtggcgggcttccatatt
cgcgatgcgctggatgcggtggcggcgcgatatccgtcgttgatcagcaagtttggtggg
catgcgatggccgctgggttgtcgttgcctgccgacaacttcccggcgtttgccgaggcc
ttcgatgcggaggtgcggcggcagttgcgtgaggaggacctgacggggcggttgctgtcg
gatggctcgctggcggtcgaggagtttcacctggagctggcgcgggccttgcgtaatgcc
gggccttgggggcagcacttccctgaaccattgttccatggggtgtttcagctggtctcg
cagcgggtcgtgggggagcggcatctcaaggtcgtgctcaagagcgagtgtggggcggtg
acgctggatgggattgcctttggggtggatcgggaggtttggccgaatcctacagtgcgg
tgggtggagttggcctacaagctggatgtgaatgagtttcgggggaatgagagtgtgcag
ttgatgattgcgcatatggaagcgcggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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