KEGG T04140: AQ505

Pedobacter sp. PACM 27299: AQ505_14295

Entry

AQ505_14295       CDS       T04140

Name

(GenBank) exodeoxyribonuclease VII large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

pep Pedobacter sp. PACM 27299

Pathway

pep03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:pep00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AQ505_14295
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pep03400]
    AQ505_14295
Enzymes [BR:pep01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     AQ505_14295
DNA repair and recombination proteins [BR:pep03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AQ505_14295

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2

Other DBs

NCBI-ProteinID:

ALL08792

UniProt:

A0A0P0NNE4

Position

complement(3387729..3389078)

AA seq 449 aa
MSELTRQIQQAIDGVFGQQTFWIIADITNYTYKPQSNYHYFELVEKDKNAARILAKVAGR
AWGNASLNITNFEKATGQKFKNDINVLVQVSVQYNPAFGLQLNLLDIDTNFTLGLFEQQR
KETLERLLRDNPGFIQKAGDRYLTRNNSLTFRPVIQRIAVISSDTSAGFQDFRHSLEHNP
FGYKFEIDDYFALVQGDGNAKQFLAQIIAVYESKKPYDALIIIRGGGSQTDFLLYDNYEL
NRAIAKFPIPVITGIGHQKNETIADLMAHTSTKTPTKAAEFIISHNRNFEDRLTDIQKMI
LIKTYQMINHHKDRLVQLNQSTINTSRQLIHGHHNHILQLSGLILTNPRILISNKRKDLT
NLSQNMQSYSRMYFLNKTGNIAHFQSVMRIMSPQNILNKGFAILKVNGKITSNADLISVG
EELTIRLADSEIKTTVKSKSAYDENEFNL

NT seq 1350 nt +upstreamnt +downstreamnt
ctgtccgaactaacccgccagattcaacaggcaattgatggtgtttttggacagcagact
ttttggatcatcgccgatatcaccaattatacgtataagccacaaagcaattaccactat
tttgagctggtagaaaaagacaagaatgcagcaaggatcctggcaaaagttgccggaaga
gcctgggggaatgcttcgctgaatattaccaattttgaaaaagcgacagggcagaaattc
aagaacgacatcaatgtattggtacaggtatctgttcaatacaatcccgcatttggatta
cagctcaacctgctggacatcgatacgaatttcacactcggcttattcgagcagcagcgt
aaagaaacactcgagcgcctgcttcgggataaccccggtttcatccagaaagcaggagac
cgatacctcacccgaaacaacagtttaacgttcaggccggtcatccagcggattgcagtg
atctcttctgatacttccgcaggatttcaggacttcagacatagtctggagcacaatccc
ttcggctataaatttgaaatcgacgattattttgccttggtgcagggcgatggcaatgcc
aaacaattcctggctcagattatcgccgtttatgaatctaaaaaaccttacgacgcctta
attatcattagaggtggcggttcacagaccgatttcctgctgtacgacaattacgaattg
aaccgtgcgatcgctaaattcccgataccagtcatcaccggaatcggacatcaaaaaaat
gagacgattgctgatttaatggcccacacttccacaaagacgcctactaaagctgcagag
ttcatcatctcgcacaaccgcaattttgaagaccgcttaactgatattcaaaagatgatc
ctgatcaagacttatcaaatgatcaaccatcataaagaccgactggtgcaactgaaccaa
tccaccattaacaccagtcgccagctcatacatggacaccataaccacatcctgcaattg
tctggactgatcctgaccaaccccaggatcctgatttcaaataaaagaaaagacctgacc
aacctgagtcaaaatatgcaatcctatagcaggatgtattttttgaacaaaacaggcaac
attgcccatttccagtctgtcatgagaatcatgagcccgcaaaatatcctgaacaaaggt
tttgcaatcttaaaggtaaatgggaaaattaccagtaatgctgatctgatcagcgtagga
gaggaattgaccattcgattggccgattcagaaatcaaaacaacagtaaaatcaaaatca
gcatacgatgaaaacgaatttaacttatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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