KEGG   Phalaenopsis equestris: 110023521
Entry
110023521         CDS       T05601                                 
Name
(RefSeq) pre-mRNA-splicing factor RSE1 isoform X1
  KO
K12830  splicing factor 3B subunit 3
Organism
peq  Phalaenopsis equestris
Pathway
peq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110023521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peq03021]
    110023521
   03041 Spliceosome [BR:peq03041]
    110023521
   03036 Chromosome and associated proteins [BR:peq03036]
    110023521
Transcription machinery [BR:peq03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     110023521
Spliceosome [BR:peq03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110023521
 Complex B
    110023521
 Complex C
   U2 SnRNP specific factors
    110023521
Chromosome and associated proteins [BR:peq03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     110023521
    TFTC complex
     110023521
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 110023521
NCBI-ProteinID: XP_020578645
Position
Unknown
AA seq 1359 aa
MAAGEKDSGGGSHHLSTQKRGAQYLAKYVFRGGAVIHAVQGHLRSPTSDDIVFGKETSLE
MVIVDEDGIVQSVCEQPVFGIIKDLAILGWNDKFRQSRPQMIGKDLLVVLSDSGKLSFLA
FSFEMHRFLVLNHIQLSKPGNSIHHLGRMLAVDPDGSFIAASAYEDQFALFSMSTHLGDS
IVDEKMFYPPENKDETSSVKDTVKTNICGTIWSICFVSHGTDHSSKGFYPIMATIMHRKG
RLRNELLLFGCTIETRAIQFISSYPEVEIGPLALKLSAVPHLSGFAVVFRIDDALLMNFR
DPYCIQCAQRINFGLPSVIEEPDFFHDSSRGMDIDDDGMSSVAVCALLELSDSVAAMAKD
DPMSVDDGMEAASTSKHVCACCWEPVGTASANLVLCLDSGELYILEIHSTIEGIRSDLSE
CLYRGLPCKELLWLKGGFVMGLVEMGDGLVLKLQDGGLVYKSNIQNIAPILDLAVVDDHD
EKKDQMFSCCGMNPAGSLRVIRAGLSVDKLVKTPPVYEGITGTWTLRMKRGDPYHSFLVL
SFVEETRVLSVGLSFCDVTDATGFRPDVCTLACGLVSDGLLVQIHRAGVRLSLPTTAAHV
SGCPHLIPFCTSWCPDNVSISSAAVGHNVILIVTSNPCILFVLGIRSLSAYQNELYEIQH
LSLQHEVSCISIPEQEINFEQLSSNFHFAKKDNQDTVFNGDGCHMTFVVGTHIPSVEVLS
FSPDQGFKFLATGAISIDNALGTPLSSCIPQDVRLVLVDKFYILAGLRNGVLLRYELPQA
SVLSSSSYYPTKLGNFRSVQLELIAFRRFGIAPVVLVPLQNSLNADVVVLCETPWLLHVA
RHSIVYTSISFQAATHATSVSSFDCPNGILFVAESSLHLLELGHRKRLNVGKFSIEGTPR
KVLYHKESKTLLILRTGLRDTSFSSDICRVDPFNGVMISKFSCELGETAKCMQIMRIGYQ
HLLVVGTSQCPGRTIMPNGEAESTKGRLIILNLDHTQNASESSSLTYYSNFSSLLIPSPS
HEAVGHAAEKLSSTSVGSSPDDWSSDGIQIEEMEAGNFRVIYQNQLPGAVLAVCPFLNRY
LLASSGNILNVFCFVTDNPLRLRKHSMTKTRFTITCLNTCFTRIAVGDCRDGILFYSYTD
DLRKLEQLYADPVQRLVADCTLLDMDTAVVSDRRGSISVLSNVDDLDGSESPEKNLLVNC
SYYMGESVISIRKGFFSYRPSLDDLLNDSDDTDIACKSLSNSIVASSLLGSVLLLVPITS
EEHYLLETVQARLAVYPLTAPVLGNDHKEFRGRLSKVGVPTMLDGDMLLQFLELTRIQQE
AVLSLPSFHSTNASTSDSHPPLSVNQVVQILERIHHALT
NT seq 4080 nt   +upstreamnt  +downstreamnt
atggccgccggagaaaaggattccggcggcggtagccatcacctttcgacgcagaagcgc
ggcgcgcagtacctggcaaagtatgtatttcgtggtggtgcggtcatccacgctgttcaa
ggccatctccgctctcccacctccgatgacatcgtattcgggaaggaaacatcattggag
atggtgatagttgatgaagatggaattgtgcaatcagtttgcgagcaacctgtatttggg
attataaaagatcttgccatcttaggatggaatgataaatttaggcaatcaaggccacag
atgataggaaaagatctattggtggttctttcagattcaggaaagctttcttttcttgcc
ttctcctttgagatgcacaggtttcttgttttgaaccatatacaattgtccaagccagga
aattcgatacatcatctcggaagaatgctggctgttgatccggatggctcttttattgca
gctagcgcatatgaagaccaatttgctttattttctatgtccacacatcttggagacagc
attgttgatgagaaaatgttctatccaccagaaaacaaagatgaaacaagttctgtgaag
gatactgtgaagacaaacatttgcggcacaatttggagcatttgcttcgtttctcatggc
accgatcattcaagcaaggggttttatcccataatggccactataatgcataggaaagga
aggttaagaaatgaattgttgttgtttggatgtaccatagaaacacgtgctattcaattt
atatcctcgtaccctgaagttgaaattgggccattggcacttaaattatctgctgttcct
catctttctggatttgcagttgtgtttaggatagatgatgctctcctaatgaattttaga
gacccatattgtatacaatgtgctcaaagaataaacttcggtttacccagtgtaattgaa
gagccggatttttttcacgattcttctagaggtatggatattgatgatgatggaatgtcc
agtgtggctgtttgtgcattgctggaactgagtgattcggtggcggctatggccaaagat
gatcccatgagtgtcgacgatggtatggaagcagcttcaacttccaagcatgtatgtgcc
tgttgttgggaacctgttggaacagcgagtgcaaatttggtcctctgtttggactccggg
gaactgtacatccttgaaattcattcaacgattgaaggaatcagatctgatctctccgag
tgcctctacagaggtttgccctgcaaggagcttttatggttgaagggtggttttgtaatg
gggcttgtagaaatgggagatggtttggttctaaagttgcaagatggaggccttgtgtac
aagagcaacattcagaatattgcaccaatcttggatttagctgttgttgatgaccatgat
gaaaagaaagatcaaatgttttcctgctgcggtatgaatcctgcaggatcattgagagtt
atacgtgctggtttaagtgttgataaacttgtgaaaactcctccggtttatgaaggtata
actggcacatggacattaaggatgaaacggggagacccttatcattcatttcttgtattg
tcttttgttgaagagacaagggtactctcagttggcttaagtttttgtgatgtaactgat
gccactggttttcggcctgatgtttgtaccctggcttgtggtttggtgtctgatgggttg
ctagttcagattcatagggcaggtgtgagattgtctttgcccactacagctgctcatgtg
agtggttgcccccacttaataccattttgcacctcttggtgccctgataatgtgtctatt
agttcagctgcagtgggacataatgtgattcttatagttacttctaacccttgcattttg
tttgttctgggcataagatcgttgtcagcctatcaaaatgaattgtatgaaattcaacat
ttgtcgttgcagcatgaggtttcttgcatatctatacccgaacaggaaatcaactttgag
cagctttcatcaaattttcattttgccaagaaagataatcaagacaccgtctttaatgga
gatggatgccacatgacttttgtggtgggtacccacataccatctgttgaggttctctct
ttttcacctgatcaaggctttaagttccttgcgactggggcaatttcaatagacaatgca
cttggaactcctttaagtagctgcatacctcaggatgttcggcttgtgttagttgataag
ttttatatacttgccggcttgaggaacggagtgctactccggtatgagttgcctcaggcc
tcagttctatcttcttcctcgtattatccaacaaagcttgggaacttcagatctgttcag
ttagaattgattgcatttcgacgcttcggtatagctcctgtcgttctggttcctctacag
aattcgctcaatgcagatgtagttgtgctttgtgaaacgccctggcttttgcacgttgca
aggcatagcattgtttatacatcaatctcgttccaagccgccacccatgcaacctcagtg
tcgtcttttgattgcccaaatggaattttatttgttgctgaatccagtttgcatttgctt
gaactgggtcatcggaaaagacttaatgttggtaaattctcaattgaaggaactccacga
aaggtattataccataaagaaagtaagacattgttaatattgaggaccggacttcgggac
acttctttctcatcagatatttgccgtgtggatccttttaatggagtaatgatatcaaag
ttctcatgcgagcttggtgaaacagcaaaatgcatgcaaataatgagaataggatatcag
catctattagtggttgggactagtcagtgtcctggccggactatcatgcctaatggtgaa
gcagaaagtacaaagggacggcttatcatattaaacttggaccatacacaaaatgcttct
gaaagcagttcattgacctattactctaatttttcatctcttctgattccttccccctcg
catgaagctgttgggcatgcagctgaaaagttatcaagcaccagtgttggtagcagtcca
gatgattggagtagtgatggaattcaaattgaagaaatggaagcgggaaacttcagggtg
atttatcagaatcaattgcctggtgctgttcttgctgtctgcccatttctaaaccgttat
ctattggcttcctccggtaatattctgaacgtcttctgttttgtgactgataatcctctg
cggctgagaaagcattccatgaccaagacacgctttaccataacttgcttgaatacatgt
ttcactagaattgcagttggtgattgtcgcgacggcattcttttctactcttatacagat
gatcttaggaaattggaacagctttatgctgatcccgtacagagattggttgctgactgc
actctactagatatggacactgctgttgtctcagaccgtagagggagcatctcagttctg
tctaatgttgatgacttagatggtagtgagagtccagagaagaacctgttagtaaattgt
tcctattacatgggagaatctgtcataagcatccgcaagggttttttctcatacagaccc
tcattagatgacttgttgaatgattctgatgacactgacatagcctgcaaatctttaagt
aatagcattgtggcaagctcacttcttggaagtgtgctcctccttgttcctattacaagt
gaagagcactatttgttagagactgtgcaggccaggcttgctgtttatcctttgactgct
cctgttctagggaatgatcataaggaattccgtggacggctctcaaaggttggagttccc
accatgcttgatggagacatgctcctccagttcttggagttgactagaatccaacaggaa
gctgtgctctctctccccagctttcacagcacaaatgcttctacttctgattcacatcct
cctctctctgtgaatcaggtcgttcagatattagaaagaattcatcatgcgttgacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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