KEGG   Phalaenopsis equestris: 110033019
Entry
110033019         CDS       T05601                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
peq  Phalaenopsis equestris
Pathway
peq03020  RNA polymerase
peq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110033019
  09124 Replication and repair
   03420 Nucleotide excision repair
    110033019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peq03021]
    110033019
   03400 DNA repair and recombination proteins [BR:peq03400]
    110033019
Transcription machinery [BR:peq03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110033019
  RNA polymerase III system
   RNA polymerase III
     110033019
  RNA polymerase I system
   RNA polymerase I
     110033019
DNA repair and recombination proteins [BR:peq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110033019
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 110033019
NCBI-ProteinID: XP_020592510
Position
Unknown
AA seq 291 aa
MSSSEETAKLFRVWKTALEMLRDRGFLVLDSEIKMSRLEFLDKFGENFKREDLDMLKTKE
DDPNDRIFVFFPNEPKLNVSVTRRYAERMRSEKIFRGIIVVQEVPTPHAKHAIEDLSQKY
YLEVFLDAELLVNVNNHMLVPKHEVLSNEEKKELLKRYTVKETQLPKMMSNDPIAKYLGI
RRGQVVKITRKSETAGIYITYRISDPMLLRAVVRRMPEQSPEICATLLRWLPQRQQARWA
SGGFPRGRPRPTKPGFAGGEGKSEWWVVDGEMHEIGDHVPHRERFAMRGRR
NT seq 876 nt   +upstreamnt  +downstreamnt
atgtcgtcaagcgaggaaacggctaagctattccgtgtttggaagacggcattggagatg
cttagagaccgcggtttcctcgtccttgattcggagatcaaaatgagcaggctcgaattc
ctagacaagttcggcgagaatttcaagcgggaggaccttgacatgttgaagaccaaggaa
gacgacccaaacgatcggatatttgtattctttccaaatgaaccaaagttgaatgtcagt
gtaacaagaagatatgctgaacggatgagatcagagaaaatatttagaggaataatcgtt
gtccaagaggttcctactccccatgcaaaacatgcaattgaagatctatctcagaaatac
tatcttgaggtttttttggatgcagagttgctggtcaatgttaacaaccatatgcttgtt
ccaaagcacgaggtactcagcaatgaggaaaagaaggaactgctgaagcgatacactgtc
aaagaaacacagcttccaaaaatgatgtcgaatgacccaattgcaaaatatcttgggatt
aggcgaggacaggttgtgaagatcaccagaaagagtgagaccgccggcatatatatcacc
tatagaattagtgaccctatgcttctacgagctgtggtgcggcggatgccggagcaatct
ccggagatctgcgctacccttctacggtggctaccgcagcgacaacaagctcgatgggca
agtgggggctttccgcgcggccggcctcggcctaccaaacctggtttcgccggtggtgag
ggcaagtcagagtggtgggtagttgacggcgagatgcacgagataggagatcacgttccc
caccgagagcgctttgcaatgcgtggaagaaggtag

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