KEGG   Candidatus Sodalis pierantonius: SOPEG_1919
Entry
SOPEG_1919        CDS       T03006                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
pes  Candidatus Sodalis pierantonius
Pathway
pes03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SOPEG_1919 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pes03400]
    SOPEG_1919 (alkA)
Enzymes [BR:pes01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     SOPEG_1919 (alkA)
DNA repair and recombination proteins [BR:pes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SOPEG_1919 (alkA)
SSDB
Motif
Pfam: HhH-GPD RecR_HhH Nop
Other DBs
NCBI-ProteinID: AHF73893
UniProt: W0HP38
Position
complement(1990380..1991021)
AA seq 213 aa
MFFEYDSKETDWLARRDKRMAQAIAHFGILRRGMMPDLFAALVRNIVDQQISTKAGLTVN
ARLLALAGSVTPQRLEALPAQAIQGCGMSMKKALYIKGAASAAMSGELDLSAIHQASDEQ
VIATLSRLPGIGVWTAEMLMIFSLGRPDVLSWGDLAIRRGMMHLYRHKTLPRDRFERYRR
RYAPYGSIASFYLWAMSTPDYAAGLAAVKPAAL
NT seq 642 nt   +upstreamnt  +downstreamnt
atgtttttcgagtacgacagcaaagaaaccgattggctggccaggcgggataagcgcatg
gcgcaggccattgcacattttggcatactccggcgtgggatgatgccggatttgtttgcc
gcgctggtcagaaacattgtcgaccagcaaatatccaccaaggcgggcctgacggtcaac
gcccgtctcctggcgctagccggctcggtgacgccgcaacggctggaagcgctgccggcg
caggcgattcaaggctgcggaatgtcgatgaaaaaggcgttatatatcaagggcgccgcc
agtgccgccatgagcggcgagctggatttgagcgccattcatcaggccagcgatgaacag
gtgatcgccaccttatcccgcctgccgggcattggcgtctggacggcggagatgttgatg
attttctccctgggcaggcctgatgtgctgagctggggagatttggccatccggcgcggc
atgatgcatctttatcgtcacaaaacgctgccgcgggatcgattcgagcggtatcgccgc
cgctacgccccctatggcagcatcgcgtcgttttatctgtgggccatgtctacgccggat
tatgcggcggggctggcggcagtcaaacccgcggcgctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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