KEGG   Candidatus Sodalis pierantonius: SOPEG_3442
Entry
SOPEG_3442        CDS       T03006                                 
Symbol
nudH
Name
(GenBank) Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pes  Candidatus Sodalis pierantonius
Pathway
pes03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pes00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOPEG_3442 (nudH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pes03019]
    SOPEG_3442 (nudH)
Messenger RNA biogenesis [BR:pes03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     SOPEG_3442 (nudH)
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AHF74752
UniProt: W0HQF3
Position
complement(3733788..3734315)
AA seq 175 aa
MIDDDGYRPNVGIVICNLDGQVLWARRYGQHSWQFPQGGINAGETAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCPDADINMQRGGIPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFSGVVMPLQETAAQRSAPAHRRKRG
NT seq 528 nt   +upstreamnt  +downstreamnt
gtgatcgatgatgatggctaccgcccgaatgttggtattgtaatctgtaatctcgacggg
caggtgctgtgggccaggcgatacggacagcattcctggcagttcccccagggcggcatc
aacgctggcgagaccgcggagcaggcgatgtaccgcgagctgttcgaggaggtcggtctg
agccgcaaagatgtgcgtatcctggcttcgacgcgtaactggctgcgttataaacttccc
aagcggctggtccgctgggacaccaagccggtgtgtattggtcagaagcaaaaatggttt
ctgctacagctcatgtgtccggatgcggatatcaatatgcagcgcggggggatccctgaa
tttgacggctggcgctgggtcagcttctggtacccggtacgtcaggtcgtttcctttaaa
cgggacgtgtaccgccgggtaatgaaggaattttccggcgtcgtgatgccgctgcaggaa
actgcggcgcagcgttccgcgccggcacacagacggaaaagaggctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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