KEGG   Populus euphratica (Euphrates poplar): 105111012
Entry
105111012         CDS       T05872                                 
Name
(RefSeq) cysteine protease ATG4-like isoform X1
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:peu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    105111012
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:peu01002]
    105111012
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:peu04131]
    105111012
   03029 Mitochondrial biogenesis [BR:peu03029]
    105111012
Peptidases and inhibitors [BR:peu01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   105111012
Membrane trafficking [BR:peu04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    105111012
Mitochondrial biogenesis [BR:peu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    105111012
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 105111012
NCBI-ProteinID: XP_011004542
Position
Unknown
AA seq 483 aa
MKGFRERGFVASAKSSSTVESPNRSFTSDSSELGSADTKISRPSLWSTFFASAFSVFDTH
CDSSSTSEKKAPHIRHGNGWTSAVKKILAGGSMRRIQECVLGTSKTGISNITSDIWLLGA
CYKISQDNSSGDATATNALAAFNHDFSSRILITYRKGFDAIEDSKLTSDVSWGCMLRSSQ
MLVAQALLFHRLGRSWRKPLDKPLDREYVEILHLFGDSESSAFSIHNLLRAGKAYGLAAG
SWVGPYAVCHSWESLVRSRREETNLEYRSLSMAVYVVSGSEDGERGGAPVLCIEEAARHC
SECSKGQEDWMPILLLVPLVLGLDKINPRYIPSLQATFTFPQSLGILGGKPGASTYIVGV
QDKNAFYLDPHEVQPVVNVSRDDVEANTSSYHCDSVVRHIPLDLIDLSLAIGFYCRDKDD
FDDFCSLASKLTDESNGAPLFTVAHSRKLLKHDSGEIWSDESLGVQTMNDVEGCVHEDDW
QLL
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgaagggttttcgtgaaagggggtttgttgcttctgccaaatcttcatctacagttgaa
tccccaaatagatctttcacttctgattcttcagaactggggtccgccgacactaagatt
tccaggccttctttatggtcaaccttctttgcatcagctttctctgtctttgatacgcat
tgcgattcatcttcaactagtgaaaaaaaagcacctcatattagacatggtaatggttgg
acgtcagctgtgaagaaaattttggcaggtggctcaatgaggaggatccaagagtgtgta
ttagggacaagcaagacagggatttctaacataactagtgacatttggctcctaggagca
tgctacaagatttcacaagataattcttctggggatgctactgctaccaatgctttagct
gcctttaatcatgatttttcttcacgaattctaatcacatatagaaaagggtttgatgct
attgaagattcaaaacttaccagtgatgtaagctggggttgtatgcttcggagtagtcag
atgcttgttgctcaggctttgctttttcatcgattagggagatcttggagaaaaccattg
gacaagccattggatcgagaatatgttgagattttacatctttttggtgattcggagtca
tcggctttctctattcataatcttctccgggctggaaaggcttatggccttgcagctggg
tcatgggtaggcccttatgcagtgtgccactcttgggaatctctggtccgctctagaaga
gaggaaaccaatcttgaataccggtcactttcaatggctgtttatgttgtttctggttct
gaagatggggagcgagggggagctccagttctctgcattgaagaagctgctagacattgt
tcagagtgttctaaaggtcaagaagattggatgccaattcttctattggttcctttggtt
cttgggcttgataaaataaatccaaggtatattccatccctgcaagcaacattcaccttt
ccccaaagccttggaattttgggtgggaaacccggtgcttcaacatatattgttggtgtg
caggacaagaatgctttttatcttgatccacatgaagttcagccggtggttaatgttagc
agggatgatgtagaggccaatacttcatcttaccactgcgacagtgttgtgcggcacatc
cctctggacttgattgatctatccttggcaattggattttattgtcgagacaaagatgat
tttgatgatttctgttcgctggcatccaagctgacagacgagtcaaatggtgcacctttg
tttacggtggctcattcccgtaaactattaaagcatgacagtggcgagatctggtcggat
gagtcacttggtgtacagactatgaatgatgtagagggctgtgtacacgaggatgactgg
caactcctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system