KEGG   Populus euphratica (Euphrates poplar): 105118265
Entry
105118265         CDS       T05872                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105118265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peu03019]
    105118265
   03041 Spliceosome [BR:peu03041]
    105118265
Messenger RNA biogenesis [BR:peu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105118265
Spliceosome [BR:peu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105118265
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 105118265
NCBI-ProteinID: XP_011014475
Position
Unknown
AA seq 797 aa
MEDGEIVEAVAMEEDMQFSSYESLKETKSSVEEIISQLLSMKRESKSKSQLPEFIAQMFL
NFVNLRQVNRSILLEEDKVKAETEKAKAPVDFTTLQLHNLMYEKSHYLKAIKACKDFRSK
YPDIELVNEDEFFRDAPQHIKGSNLSTDTSHNLMLKRLNYELHQRKELCKLREKLEQKKK
GLLETIANRKKFLLSLPSHLKSLKKASLPVQNQLGVLHTKKLKQHNLAELLPPPLYVIYS
QLLAQKEAFGECIDLEVVGSVKDAQAFARQQANKDSSISTNVETSRLEDDAPDEEDDGQR
RRKRPKRVQSKEGVDQAGSYQAHPLKVFLHIFDDEISDPKSAKLITLKFEYLLKLNVVCV
GVEGSLEGPENNILCNLFPNDTGAELPQQSAKLIVGDNLAFDERRTSRPYKWAQHLAGID
FLPETAPLLSDLETASSETAKNEIVLSGLSLYRQQNRVQTVVQRIRSRKRAQLALVEQLE
SLMKLEWPPLNCESVPWVLHTPLCNLHGWSPAGPPPNQASTLAVTDTNIVQEPIDVNMDG
RLESAREDGELPSLIAAASAVNDVKLAPKVSTIEHSRQLSLISKSIISPISKVKSQSFKK
HEEDFDLLLDTDSDLDELSQIEPEVETDASIKYHEIAEKSWVDYGVKEYTLVLIRKKDDG
EKKVKLEAKVKISMEYPLRPPLFGLSLYSAAENHDENNGSGRYNELRAMEAEVNLYMLKL
LPLDQENHVLAHQVRYLAMLFDYFMDEASPSAKCTSVVDVGLCKPVSGSLLARSFRGRDR
RKMLSWKDMECTSGYPY
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggaggacggcgagatagtggaggcagtggcaatggaagaagacatgcaattctcttcc
tacgaatcactcaaagaaaccaaatcctccgtagaggagatcatttcccaactcctctct
atgaaaagagagtccaaatccaaatctcaacttcccgaattcatcgctcaaatgttcctc
aacttcgtcaatctccgccaggtcaataggtcgattttgctggaggaagataaagtgaaa
gcggagacggagaaagcaaaagctccggtggactttacgactttgcagttacataatttg
atgtatgagaagagccattatcttaaagctataaaagcttgcaaggattttagatctaaa
tatcctgatattgaacttgtaaatgaagatgagttttttcgcgacgctcctcagcatatt
aaagggtcaaatttgtctactgatacttcgcataatttgatgctgaagagactaaattat
gagcttcatcagagaaaagagctgtgtaagttgcgtgagaaactggaacagaagaagaaa
ggtttgttggagactattgcgaataggaagaagttcttgttgagtttgccgtcgcatctt
aaatcgcttaagaaagcttcattgccagtacagaatcagttaggggttctgcataccaag
aaattaaagcagcataacttggcggagttacttccgcctccactttatgtgatttactcg
cagttgttggcgcaaaaggaagcatttggagaatgtattgatctggaggtggtgggaagt
gttaaagatgctcaagcatttgctcgtcagcaagcgaataaggacagcagtatctctacc
aatgtagagacttccaggttggaggacgatgcacctgatgaggaagatgatggtcaaaga
aggagaaagaggccaaagagggttcaaagcaaagagggcgttgatcaggcaggatcatat
caagctcatccgctcaaggtttttctccatatatttgacgatgagatttctgatccaaaa
tctgcaaaactcattacgctgaagtttgaatacttgctgaagttgaatgttgtatgtgtt
ggggttgaagggtcacttgaaggaccagaaaataacatcttatgcaacttatttcccaat
gacactggagctgagctgcctcagcagtcagcaaagctcattgtaggtgacaaccttgca
tttgatgaaaggagaacttcacgtccatataaatgggcccagcatttggcaggaattgat
ttcttacctgagacagccccgttactcagcgaccttgaaactgcaagcagtgaaactgct
aaaaacgagattgttttatctggattgtcactgtatcgccaacagaatcgggtgcagaca
gttgtgcaaagaattcgctctcggaaaagggctcagctggctcttgtggaacaacttgaa
tcgcttatgaagcttgaatggcctcctctgaattgtgaaagtgttccatgggttttgcat
acacctttatgcaatttacatggctggtcgccagcagggcctccacctaatcaagcttca
actttggctgttactgatacgaatatagttcaggaaccaatagatgtcaatatggatgga
agattggagagtgctagggaagatggggagcttccatctctaattgcagctgcttctgct
gtgaatgatgttaagcttgctccaaaagtatctactatagagcattccaggcagctgagt
ttaatatcgaagagcattatatcaccaattagtaaggtgaaatcacaaagtttcaagaaa
catgaagaagattttgatctcttgctggatactgatagtgatttggatgagctttcacaa
attgagccagaggtagaaaccgatgcttctattaaataccatgaaatagctgaaaagtca
tgggtggattatggggttaaagaatatactcttgtcttaataaggaaaaaggatgacgga
gagaagaaagtcaagttagaagcaaaggttaaaatcagcatggagtatcctcttaggcct
cctctctttggcttgagtctgtacagtgctgcagaaaatcatgatgagaataatggctct
ggacggtacaacgaacttcgagccatggaagctgaggtaaatctttatatgttaaagctg
ctacctttggatcaagaaaatcatgtcttagctcatcaagtgcgctatcttgcaatgttg
tttgactatttcatggatgaggcatctccaagtgcaaaatgtacttctgttgtcgatgtt
ggtttgtgtaaacctgttagtggtagtcttcttgctagatcatttagagggagggatcgt
aggaagatgttatcctggaaggacatggaatgcacctctggctacccatactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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