KEGG   Populus euphratica (Euphrates poplar): 105121212
Entry
105121212         CDS       T05872                                 
Name
(RefSeq) uncharacterized protein LOC105121212
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03022  Basal transcription factors
peu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105121212
  09124 Replication and repair
   03420 Nucleotide excision repair
    105121212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peu03021]
    105121212
   03400 DNA repair and recombination proteins [BR:peu03400]
    105121212
Transcription machinery [BR:peu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     105121212
DNA repair and recombination proteins [BR:peu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     105121212
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 105121212
NCBI-ProteinID: XP_011018070
Position
Unknown
AA seq 187 aa
MVVSSNNHHNKEILVRRRIASIFNKREEDFPSLREYNDYLEEVEDMIFDLVAGVDVPAIE
EKIAEYQKENADLILINQARKAEELALAMAASKGPRAQTDNTDGSSQGGIISVEAGQYAP
TIAGGQPRPIGIAPQPVPLRGGPDMHGYAEDEETMRIRTERASSAAGWSIEFSKKRAFEE
AFASICV
NT seq 564 nt   +upstreamnt  +downstreamnt
atggtggtctcaagtaataatcatcacaacaaggagatactagtcagaagaaggattgct
agcatatttaataagcgagaagaggattttccatcgttgagggagtacaatgattacttg
gaggaagtagaagacatgatatttgacttggttgctggagttgatgtccctgctattgaa
gaaaaaattgcagagtatcaaaaagaaaatgcagatctaatattgattaatcaagctcgg
aaggctgaagaattggccttagctatggcagcaagcaaggggcctcgtgcacaaactgat
aatactgatgggagctcccagggaggcatcatcagtgttgaagctgggcagtatgcacct
acaattgctggagggcagcctcggccaataggcatcgctcctcaaccagtgcctctcaga
ggagggccagacatgcatggatatgcagaggatgaggaaacaatgaggatccgaacagag
agggcgagtagcgccgctgggtggagcatagagttcagcaagaaaagggcatttgaggaa
gcctttgcaagcatttgcgtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system