KEGG   Populus euphratica (Euphrates poplar): 105127945
Entry
105127945         CDS       T05872                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:3.6.4.13]
Organism
peu  Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:peu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:peu03041]
    105127945
Spliceosome [BR:peu03041]
 Complex C
  Other components
   Complex C specific factors
    105127945
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 HA2_N AAA_19 AAA_30 AAA_7 AAA_11 ResIII nSTAND3 T2SSE AAA_29 AAA_23
Other DBs
NCBI-GeneID: 105127945
NCBI-ProteinID: XP_011027723
Position
Unknown
AA seq 702 aa
MSQQFWKPGSEKPRIIEDEEGGVVFFGPPLSSAASSSSRFGYASIGSQRQRLPVYKYRTA
ILYLVETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQTVASRVAE
EMDVKLGEEVGYTIRFEDVTNPAATMIKFLTDGVLLREIMDDPLLTKYSVIMVDEAHERS
ISTDILLGLLKKIQRRRPELRLIISSATIEAKSMSDFFQTSKKHRESEDQEFVPRKVPAI
LSVEGRGFNVHIHYVVEPVSDYVQATVSTVLSIHEQEPAGDILVFLTGQDDIDAAIRLLN
EEAHASRKISSGLIVLPLYSSLPRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGVVYV
IDSGFSKQQFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVNEMSS
VGIPEMQRSKLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLT
SPVGFQAAEIPLDPMISKMILSSNQLGCSDEIISIAAILSIQSIWVSGRGVQKELDEAKL
RFAAAEGDHVTFLNVYKGFLQSGKSSQWCHKNYMNYQAMKKVIEIREQLRRTALRLGIVL
KSCEGDILAVRKAVTAGFFANASRLEAFSHNGMYKTVRGSQEVYIHPSSVLFRVNPKWVI
YHSLVSTDRQYMRNVMTVDPSWLTEAAPHFFQHQRRPDPIGH
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgtcacaacaattctggaaaccgggcagcgagaaaccccgcattatcgaagacgaagaa
ggcggtgtagtatttttcggcccccctctctcttccgctgcctcctcttcctccaggttt
ggatatgcaagtattgggagtcaaaggcagagattgcctgtttacaagtacaggacagca
attctgtacctcgtagagactcacgccaccactattatcgtcggcgagaccggtagcgga
aaaaccacgcaaatccctcagtatcttaaagaggctggttgggctgatggtggacgtgtt
atagcttgcacccagccgagaagactcgcagtccagacggttgcttcaagggtggctgaa
gagatggatgttaagcttggagaggaagtcggttacacaattcgatttgaggatgttacc
aatccagctgcaactatgattaagtttctaacagatggggtattattgagagaaattatg
gacgatccgcttttgaccaagtatagtgtcatcatggtagatgaggctcatgaaaggtct
atttcaactgatattctactaggtctcctgaaaaagatccagcgacgtcgacctgaactg
cgcctgattatctcatctgctacaatcgaggcaaaatccatgtcagatttcttccagact
agcaaaaagcatcgagaatcggaagatcaggagtttgttccaaggaaggttcctgcaatt
ttatctgttgagggcagagggtttaatgtacacatacattatgttgtggagcctgtctca
gactatgttcaggctactgtttcaactgtattgtcaattcacgagcaggaacctgcaggt
gacattcttgtatttctcactggtcaagatgatattgatgctgctattcggctgcttaat
gaagaagctcatgccagcagaaagatctcttcaggattgattgttttgcctttgtactcc
agtctcccacgagcagaccaggatctggtgttttccccaactcctagagggaagaggaaa
gtggtgatatcaaccaatattgcagagacgtcattgacactggagggcgttgtctatgtt
attgacagtggattctcaaaacagcagttctacaatccgatctcagatattgaaaatcta
gtggtggcccccatatcaaaggcgtctgctagacaaagagctggtagagctggaagagtt
cgacctgggaagtgttacaggttatacacggaagagtactttgtcaatgaaatgtcttct
gttgggatcccggagatgcaaaggtcaaaacttgtttcctgtgtgattcagttaaaagcc
ttgggaatagacaatatactaggctttgattggccagcatctccaccacctgaagcaatg
attcgagcacttgaagttctttattcactaggagtccttgatgatgatgctaagcttact
tcgcctgttgggtttcaagcagcagagattccattagatccaatgatatctaaaatgata
ctatcttcaaaccagctaggatgttctgatgagatcatctcaatcgcagctattctctcc
atccagtctatttgggtttctggtaggggggtgcaaaaggaattagacgaagccaagttg
agatttgcagctgctgagggtgaccatgttacattcctaaatgtttataaaggttttctt
caatctggtaaatcatcgcaatggtgtcataagaattatatgaattaccaagctatgaag
aaggtaattgaaattagggaacagctcagaagaacagcgctgagattaggcatagtctta
aaatcttgtgaaggggacattctggcagtaaggaaagcagttactgctggattttttgca
aatgcaagtcgtttagaagcattcagtcataacgggatgtacaagactgttagaggttct
caagaagtttatattcatccttcgtctgtgttgttcagagttaatccaaaatgggttata
taccactctcttgtctcaacagaccggcaatacatgcggaatgtcatgactgttgatcct
tcttggctaacagaggctgctccacattttttccagcatcaacgaagaccggatcccatt
ggtcactaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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