KEGG   Populus euphratica (Euphrates poplar): 105135579
Entry
105135579         CDS       T05872                                 
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
peu  Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:peu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:peu03009]
    105135579
Enzymes [BR:peu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     105135579
Ribosome biogenesis [BR:peu03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    105135579
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB FtsJ Met_10 Methyltransf_31 Methyltransf_15 Methyltransf_25 GCD14
Other DBs
NCBI-GeneID: 105135579
NCBI-ProteinID: XP_011038802
Position
Unknown
AA seq 524 aa
MAQVLSLHVLFSAEIHKVGPSKPLKRIHKPKTSLSTRRKGPQSPLRKTQKLNLQVSPHRA
VSAVRLMRIEMGGAFADLLNDKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTVIVGGT
IRWRRYLDYLIGSLCHDEKAFRSMEPLLLQILRIGFYEIVKLDMPSYAVVDENVRLAKVS
LRPGAGNMVNGILRKLVLLKGSNSLPFPKLEGDDRAQARALAILHSHPVWMVRRWTKLLG
QEKAIKLMMWNNDDPSFSLRANSGKGVTRADLVMQFNMLKVPHELSLHLDHFVRVKTGLQ
IVIQAGLLKQGLCAVQDESAGLIVSVVDPQPGDSIIDCCAAPGGKTLYMASQMHGQGMLY
AIDINKGRLRILKETAKLHQVDGVITTILSDLRTFAESYQLKSDKVLLDAPCSGLGVLSK
RADLRWNRRLEDLEELKKLQEELLDAASILVKPGGVLVYSTCSIDPEENEERVDAFLLRH
PEFHIDPVDRYVPPDFVTKHGFYSSDPVKHSMDGAFAARLIRTL
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggcacaagtgctttccctccatgttcttttctctgcagaaatacacaaggttggtcct
tctaagccactgaagaggattcacaagcccaaaacatctcttagcacccgtagaaaaggt
cctcagagtcccttgcgcaaaacccagaagttgaatttacaggtttcgcctcatcgagct
gtttctgcagtaaggttgatgagaatagagatgggtggtgcatttgctgatcttttgaat
gataaagggaaagggtctggtgataatgagatgggatacgttgaaagaactcttgggttc
cgaaccaaggacctggatgatcgtgatcttagattggttacggtcattgttggaggcacc
attcgctggagaagatatcttgattatctaatcggatcattgtgccatgatgagaaagca
ttcaggagcatggaacctcttctcttgcagattctccggattggcttttatgagattgtg
aagctagacatgccatcatatgctgttgttgatgagaatgtgaggcttgccaaagtttcc
ctcaggcccggtgctggcaacatggtcaatgggattctccggaagctagtgctgcttaag
ggaagtaactcactcccctttcctaaattggaaggtgatgatcgcgcccaagcacgcgcc
cttgccatccttcattctcatcctgtgtggatggtaaggcgttggacgaagcttttaggg
caagaaaaagcaattaagctgatgatgtggaacaatgatgatcccagtttcagcttgagg
gcaaacagcgggaaaggagttacaagagctgaccttgtgatgcagttcaatatgttgaag
gttcctcacgagctttctttgcacttggaccattttgtccgtgttaaaactggactgcag
attgtcatacaagctggattgctgaaacaaggtctatgtgcagtccaggatgagagtgca
ggtttgatagtttctgtagttgatcctcaacctggcgatagcatcattgattgttgtgct
gctccaggaggaaagacgctttatatggcatcacaaatgcatggccaaggcatgttatat
gcaattgacattaacaaaggccggttgagaatccttaaagagacagccaagttgcaccaa
gtcgatggtgtcattaccaccatcctctctgatcttcgcacctttgctgaaagttatcag
ttgaagtctgataaggttttgctggatgctccatgttctgggcttggtgttctgtccaag
agagcagacttgcggtggaataggaggttggaggatttggaagaacttaagaaattgcag
gaggagcttcttgatgcggcttccatattggtaaagcctggtggagttttagtatacagt
acttgttccatagatcctgaagagaatgaagagagggtggatgcatttcttctcaggcat
cctgaatttcacatagatcctgttgacagatatgtgccacctgattttgtaacaaaacat
ggtttctattcctccgatcctgtaaaacattcaatggacggtgcctttgcagctcgccta
attcggaccttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system