GenomeNet

Database: Pfam
Entry: Calici_PP_N
LinkDB: Calici_PP_N
Original site: Calici_PP_N 
#=GF ID   Calici_PP_N
#=GF AC   PF08405.15
#=GF DE   Viral polyprotein N-terminal
#=GF AU   Wuster A;0000-0003-4162-5931
#=GF SE   Pfam-B_4167 (release 18.0)
#=GF GA   24.20 24.20;
#=GF TC   24.30 25.40;
#=GF NC   24.10 22.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR013614;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This domain is found at the N-terminus of non-structural viral
#=GF CC   polyproteins of the Caliciviridae subfamily.
#=GF SQ   2
#=GS A0A8D2H9J5_UROPR/72-187  AC A0A8D2H9J5.1
#=GS POLG_NVN68/183-540       AC Q83883.1
A0A8D2H9J5_UROPR/72-187             fsv---SDRTRPKRGDLIEIFRGTFEHWAIYVGKGYVVHLTSPSKDFHLNKsIAIvkkELLSvvAggnKYRVNnkndnkYEPQPPDKIV-QQAEEMVGKYIRYSLTENNCEHFV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------nklryg
POLG_NVN68/183-540                  ...RSTTPATEPTIGDMIEFYEGHIYHYAIYIGQGKTVGVHSPQAAFSITR.ITI...QPIS..A...WWRVC......YVPQPKQRLTYDQLKELENEPWPYAAVTNNCFEFCCQVMCLEDTWLQRKLISSGRFYHPTQDWSRDTPEFQQDSKLEMVRDAVLAAINGLVSRPFKDLLGKLKPLNVLNLLSNCDWTFMGVVEMVVLLLELFGIFWNPPDVSNFIASLLPDFHLQGPEDLARDLVPIVLGGIGLAIGFTRDKVSKMMKNAVDGLRAATQLGQYGLEIFSLLKKYFFGGDQTEKTLKDIESAVIDMEVLSSTSVTQLVRDKQSARAYMAILDNEEEKARKLSVRNADPHVVSSTNALISRISMARAAL......
#=GC seq_cons                       ......ostTcPphGDhIEhacGph.HaAIYlGpGhsVtlpSPptsFpls+.IsI...p.lS..A...haRVs......Y.PQP.p+ls.pQhcEh.sc.h.YuhspNNC.cFs............................................................................................................................................................................................................................................................................
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